Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1515 |
Symbol | |
ID | 5327802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1469454 |
End bp | 1471100 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640794070 |
Product | hypothetical protein |
Protein accession | YP_001330725 |
Protein GI | 150403431 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000386957 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | TTGAGCGTTT ACGATTTTGA TATAAACCTT CAAAAAGTAT TTTACAATTA TTTTAAGGAA TTTAAAAGCA CCAATTGGAA AAACTGGTTA GATATATCCT CAATTGAAGA ATACGAAGAA GCAATTTTTA AAAATTCGGG GCTTTCAAGA GATATCTTGG ATGAAATTTA TTTAAAAAAA ACTGATCCAA AGGAGTTTTC ACTAAATCCA CAAGTTTTTT TAAAGGATAG TCTTGAAAAA GATGATATAA TTGATTTATT TTCAAAGGAC ACTGCAATAA TAACTCACAC TTCTGGAACT TCTGGCGGAG ATATTACAAA ATTGAAGTGG TTTTTGATTT CTGATGATTT TTTAAAAAGA GTCTGGATTC CCGGAATGCA AGCAATATTT GAGTCGAGCG GTTTATCAAA AAATAAATCA GCGGTAATTT TTGTTCCAAG CAGGATCAAA GTTGACGGGC TTTCAAAAAT CGATGATTTA AATCTTGTTC GCCTTTACAC ATCAGAATTT TCCCAAAGGG TAGTTTTATC ACACATTAAA CCTTCTTCAT ACTTAATTGA TGAATACAAA AATGCGCTTA ATATACTTAC AATTTCAAAA ATACTAACTC TTGATGATAT TTCAGTAATT TCTGCGCCCG CTGCAACGAT TATCAAATGG GCAGACATTG ATAAATTAAA AGCAGGACTT GAAAAATCAA TAAATTCTAT TGACTGGGAT TTGGTAAAAG ATGAATATTT GGAAGCTTTC GAATTAAAAA AATTGTATGA AAAAATTGGG CTTGATAATT TTGCAACAGA AATTCAAAAC AGGCTTTCAG AGGCACTTAA AGATTCTACG CTTATATTTA GCATAACGTC CCTCTCAAAA GACGAATGGA TGAAAATTAG GAAATTTATG GGCTGGAATA TTGGTGAAGA AAAGTTTACA AATCTTTATG TTGGGAGCGA AATCGGCCCA TTTGCAGGCG GGATAAATAA AGAAGATAAT TATCGAATGT ATGTATTTCC TCTAACTTAT CCTGTGATTG AAAGAAAAGG AAAAAAAGAA TTTATTTCTA AAACTAAAGA TAAATATGGA GTTTTACTTG TTTCGAGACC GGGATCAGAT CCTTTAATAA ATATTGATAC TGGCGATGTA GTTACGATAT TAAATCAGGA TGGAATTCCA AAAATCTCAG GTGAAATTTT AAGATCTGGA TTTAAATTAA AATTAGAAAT GAAACTCGAA GGTTTTCCTG AAAACACCGA ATTTTTTGCT GGAGATTACT TTGATATTGG TGGAATTGAA GTATTCAATC CTCGAAAGAT GGTTTCTTGT ATGGGACAAA GATTTGGATT GGAAAAAGAT AATCCTGTGC TTTTGGTGTC CGGAGAATCT TACAAAATGG TTTTACCGCT TGAAAATAAT AAAAATGTTC TCATTGATAA AATAAAAGAT GAAATGCCAA ACTGTTCTAT TGGGCAGGAT ATTGAAGAAG CTTTGAAAAA TGATAAAATT TCGCTTGAAA TGGGAAATAC AAATGTTAAA ACTTCAATTG ATCACGCAGA ACTATTAGAA AAGGTTAAAA AGGGCGACCT TCCAAAAGGG GTTCTCAAAA AATGGCCGTT TTACATTTTA AACGTGCCTG AAAATTCAGA AATTTAA
|
Protein sequence | MSVYDFDINL QKVFYNYFKE FKSTNWKNWL DISSIEEYEE AIFKNSGLSR DILDEIYLKK TDPKEFSLNP QVFLKDSLEK DDIIDLFSKD TAIITHTSGT SGGDITKLKW FLISDDFLKR VWIPGMQAIF ESSGLSKNKS AVIFVPSRIK VDGLSKIDDL NLVRLYTSEF SQRVVLSHIK PSSYLIDEYK NALNILTISK ILTLDDISVI SAPAATIIKW ADIDKLKAGL EKSINSIDWD LVKDEYLEAF ELKKLYEKIG LDNFATEIQN RLSEALKDST LIFSITSLSK DEWMKIRKFM GWNIGEEKFT NLYVGSEIGP FAGGINKEDN YRMYVFPLTY PVIERKGKKE FISKTKDKYG VLLVSRPGSD PLINIDTGDV VTILNQDGIP KISGEILRSG FKLKLEMKLE GFPENTEFFA GDYFDIGGIE VFNPRKMVSC MGQRFGLEKD NPVLLVSGES YKMVLPLENN KNVLIDKIKD EMPNCSIGQD IEEALKNDKI SLEMGNTNVK TSIDHAELLE KVKKGDLPKG VLKKWPFYIL NVPENSEI
|
| |