| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1476 |
|---|
| Symbol | |
|---|
| ID | 5328919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1437229 |
|---|
| End bp | 1439118 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640794031 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001330687 |
|---|
| Protein GI | 150403393 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0840849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTAAAC GTTATATTCT TTTTTTATTA CTTTTGTTGT GTGTTTCAAC AGTAAACGCA
GGTACAACAA CTATATCGTC TAGTGATCAA ACGAGCGACT ATTATGTAAT ACTAAATAAT
CCGTATACTG ATGAATTATT GCTCTCAGCA TTAAACACCA CTTCATGGAG TCATTATATC
CCGGTAGTTG TTGGGTATGG AGATAATAAA GTGTATTTTT CTTCGGAAAA AGATTTGGCA
AGATTTTGTA CGGTTTTAGC ATATAATAAT AAAGTATTGC CGTTTTCGGG GGAATATGTA
GCATATATCG GGGATCAACC TGCGACTGTT ACAACATATT ATTCAACATC AACTACGACA
CGTACCGGAT ATGTTGAAAA CGCACAATAT GCGTATATTT ATGCAGTGGC CTATACTGGT
GGAGATTATT ATGGGTCCGA ATCATACGTG TATTTTAATT CTGAGTCCTT AGCCCATACT
GAGGGGAAAA ATGCAGTTTC TGGTCAATTT ACTTCAAGGG CGGTTTCGGG AACCTATGAC
CATAGGGTTT GTTGTGCCGG ATACCAAGGT TACGGGTTTT ATTCTGTAAC AATCTTTGAT
TATGTAGATT ATGATGATAC ATTAGTTACT ACATTAATAG AACCTCCCGA CCAGGGGACT
GTGTCGATCA ATACTGAACC AGAAACAGCA GTCTATGACG GGGATATATT ACTAGGTACA
ACCGATAACG GCGGACTTTT AGAAATAGAT ATCCCGATAG GAGAATATAA TTTAAAACTA
GTGAAAGAAG GGTACTGGGA CGCGTACGAA TATATCAACG TAAATATTGA GAATGAAACG
GAGTTATTTG TTTCACTTTC CCCAAATTCT GCTATTTTCC AAGTTTCAAA AGAGTTTTCT
GAAGAAATAT ACCCAAATTC TGTTGGAACT CTCTCGATGG ACGTATCCCC TGTTAAAGAT
GCTTATGCTA CAAAATTAAG GGTTTCGGGG GTTGAAGTAA ACAAGGTTTA TTACCACACT
CAAGAGATCC CAAAAGCAGC TGATGGATCT TACATTTTAG GGGATATCAC AAATACACAA
AATCTCGAGA TTGAGTTTAA AACTCCTTCA TCATGGGGTC AAAAAACATT TACTGTTGAA
TTATCTGCCG TAGATATCGA AGGTACAGCT TACACAAACC TTGAAACGAT TAATTATGAA
GTTTTGGAAC TTCCATTTTT ACTCGAAATG CCTGAAACTT TTGGAATCGG AACAAATGAT
ATTACAGTAA CTGACATGTC TGGAACTGCT TATTCAGTTT TACTGGTTCT TTACGATTCT
GAAGATGTTG AACAGTGGAG TTCAAGCACC AGCCTTTTGG AATACTGTGA TTACACGTTT
GAAGTTCCAA TTGATGATGC AGATGACTAT ACAATTGAAT TAATTGCAAA AGCAGGAACT
GTAAAAACAT ATTATTCAAT CGAAATAATT GAACCAGTAA CTTTGATTAC TGAAGAAATC
ACTGCAAATT CAGGAAATGT TGCAACAGTT CAGTTTAAGA TCTCAAACCC TACTTCAAAT
GTAAAATATT ATACTGCTGA GTTAACCTGT CCGTTTTATA ACGAATCAAT TGCTAAAACG
TTTTCAATAG CCCCTGAAAC GGTTGACAAA ACAGTTGACA TTTCTTTTGA AGTTCCAGAA
GAGTTAGAAC TTGAAAACTA CCAACTTTCA TTAGAAATAT TTGATCCTGA TAAAACGGAT
GCGATTTATT CTGGAAATGT TGTTTTAACT ATTTCAGAAA GTTCACTTTT CCTGGCTTCA
GTTCCTGGAG GTAACACAAC ATTGATTCTT TTAGCTGCTG CAGTTCTTTT AATTGCAGGA
ACATTTGCAG CATTGAGGCT GAAAAAATGA
|
|---|
| Protein sequence | MIKRYILFLL LLLCVSTVNA GTTTISSSDQ TSDYYVILNN PYTDELLLSA LNTTSWSHYI
PVVVGYGDNK VYFSSEKDLA RFCTVLAYNN KVLPFSGEYV AYIGDQPATV TTYYSTSTTT
RTGYVENAQY AYIYAVAYTG GDYYGSESYV YFNSESLAHT EGKNAVSGQF TSRAVSGTYD
HRVCCAGYQG YGFYSVTIFD YVDYDDTLVT TLIEPPDQGT VSINTEPETA VYDGDILLGT
TDNGGLLEID IPIGEYNLKL VKEGYWDAYE YINVNIENET ELFVSLSPNS AIFQVSKEFS
EEIYPNSVGT LSMDVSPVKD AYATKLRVSG VEVNKVYYHT QEIPKAADGS YILGDITNTQ
NLEIEFKTPS SWGQKTFTVE LSAVDIEGTA YTNLETINYE VLELPFLLEM PETFGIGTND
ITVTDMSGTA YSVLLVLYDS EDVEQWSSST SLLEYCDYTF EVPIDDADDY TIELIAKAGT
VKTYYSIEII EPVTLITEEI TANSGNVATV QFKISNPTSN VKYYTAELTC PFYNESIAKT
FSIAPETVDK TVDISFEVPE ELELENYQLS LEIFDPDKTD AIYSGNVVLT ISESSLFLAS
VPGGNTTLIL LAAAVLLIAG TFAALRLKK
|
|---|
| |