Gene MmarC7_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1470 
Symbol 
ID5328947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1430888 
End bp1432147 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content46% 
IMG OID640794025 
Productperiplasmic binding protein 
Protein accessionYP_001330681 
Protein GI150403387 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000805448 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0690389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGAG GTGGACAAAT GAAAATAAAG GCTAAGTTAT TCAGTCAGGC ACTGATTCTT 
ATTCTTATAT CCCTGATCGT CATCTTTGCA GGGTGTGTCT CTGAAGATAC ATCTGGAAAA
GAACAAAAAT CAGGCGTTGC AGGGTCAGAT TATCGGACTG TCATCGATTC CCGTGGAGTT
GCAGTTGAAA TTCCGTCGGA CGTCAAAAGA GTTGCTACAG TCTCTGATGG CCTGATCGAA
GGGACAATGT ACGCTCTCGG AGTTGAAGGT ACTATTGTTG GCATAGGTTC ATCGGCTTTA
CAGAGTGAAT GGACATATTC CTACCCAACA GATGACGGAG GCGTCGTGAA CGGCACTGGG
GGGCACCATG TAATAAAGGA GCTAATTGAA AATATTGAAG ACATCCCGCT TTTTGCACAA
TATGGATCTC CACTTAATTA TGAAACGCTG TCTTCTTTAG AGCCCGATGT TGTTATAGTC
AGACTTGGAA CCAGTGCCTT CTGGGAAGAT GCCGAAGCTG CTCAAAAGAC GATTGATAGG
ATTGAGTCTT TGGGTATGCC AGTTGTTGTT CTGTACAGCC CCAATTGCTA TGATGATGCA
TCTCTTACCA GGATCTCTGA CGAAATCGAA ATAATCGGGG ACGTATTCGA TAAGAAAGAA
GATGCAGCAG AAATTGCAGC ATATCTCGAA TCTCAAATTG CACTTGTGGA GGAACGTACT
TCAGACATTC CCGAAGATGA AAAACCCTCA GTGCTTATGT TTGGACTTTC TCCTACTCAC
CGGGCACAGG GGGGTGCTGG AGTCGCCCAG GGTCTCGGGA CTGCAGAATC CTATATGATA
GAGACTGTTG TTAATGCCAA AAACGCCTAT CAGGTGGATA TAGGTACATT CCAAATCGTC
AATACAGAGC AGGTGCTTGC CCTTGATCCC GATGTAATTG TCCTTTGTAC TGCATGGGGA
TACCATCCAC CTGGGGAACT GACAGAGGCT ACTTATTATG AATCACTCAG GGAGCTCAAG
GCCGTCAAGA ACGGGCGTAT AATGTCCCTT CCATGGACCC CATGCAACTG TGCAAAGAGA
ATTGAGTACC CGATAGATGT GATGGTAATA GCAAAAGCTG CATACCCTGA CAGATTTGAA
GACATCGAAC TTGACGAATG GCTTATAGAA TTCTACATGA ATACATATGG TGTCGACCAG
ACAACAGCGG AAAAGCTGCG GACAGCACAA TGGATGGATT GGTGTGTTGG AGAGCAGTAA
 
Protein sequence
MVGGGQMKIK AKLFSQALIL ILISLIVIFA GCVSEDTSGK EQKSGVAGSD YRTVIDSRGV 
AVEIPSDVKR VATVSDGLIE GTMYALGVEG TIVGIGSSAL QSEWTYSYPT DDGGVVNGTG
GHHVIKELIE NIEDIPLFAQ YGSPLNYETL SSLEPDVVIV RLGTSAFWED AEAAQKTIDR
IESLGMPVVV LYSPNCYDDA SLTRISDEIE IIGDVFDKKE DAAEIAAYLE SQIALVEERT
SDIPEDEKPS VLMFGLSPTH RAQGGAGVAQ GLGTAESYMI ETVVNAKNAY QVDIGTFQIV
NTEQVLALDP DVIVLCTAWG YHPPGELTEA TYYESLRELK AVKNGRIMSL PWTPCNCAKR
IEYPIDVMVI AKAAYPDRFE DIELDEWLIE FYMNTYGVDQ TTAEKLRTAQ WMDWCVGEQ