Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1461 |
Symbol | |
ID | 5329014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1423400 |
End bp | 1423993 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640794018 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001330674 |
Protein GI | 150403380 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0279876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGAGA TAGATATGAA AGCAAATATC GAAGACAAAA GAAAAGCCGT TATGGATGCT GCTTTGAAAC TTTTTACTGA ACGTGGATTT CAAGGTACAT CTACAGCCCA AATTTCAAAA GAAGCAGGAG TAGCTACGGG TACGCTCTTC CATTACTTTC CAACGAAAGA AGACCTGATA AACAATCTTT ATTTCGAAGT AAAGGGTGGT TTGAGCCGAG CTATGGTAAA AGACCTCGAA TCACAAGTTA GCTTTAAAGA CCGTTTGAAG AAAATATGGG ATAATCTAGT TAGGTGGGGC TTAGATAACC ATGATGAGTT TCTTTTTGTT GGGCAATTTT GCAATTCTCC GTACATATCA AATTTTACTC GTGAAGAAGT TATGAAAGAG TACGTATTCT TACATACGCT TGTTGAAGAA GGTTTAAAAG AAGGACACAT TAAAGAATTA CCTTCAGAAC TGGTCATGGC AATGTTTTAT CAAAACAGCA GGATCGTTGT GGAGGTAATT TCTGGCTATG ATTCATCCAA AGACGAAAAT AAACTTATAG ATGACGGGTT TGAGATAATC TGGAATGGGC TTACCAGAAA CTAA
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Protein sequence | MDEIDMKANI EDKRKAVMDA ALKLFTERGF QGTSTAQISK EAGVATGTLF HYFPTKEDLI NNLYFEVKGG LSRAMVKDLE SQVSFKDRLK KIWDNLVRWG LDNHDEFLFV GQFCNSPYIS NFTREEVMKE YVFLHTLVEE GLKEGHIKEL PSELVMAMFY QNSRIVVEVI SGYDSSKDEN KLIDDGFEII WNGLTRN
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