Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1400 |
Symbol | |
ID | 5329180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 1363772 |
End bp | 1365130 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640793958 |
Product | regulatory protein MarR |
Protein accession | YP_001330614 |
Protein GI | 150403320 |
COG category | [S] Function unknown |
COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGC CGATTTCAAC TAATTACAGA ATATATCTAA TAATTGCATT AATTTTTTGT TCGATAAGTA CGGTTGATTC ATACAGGTTT GATGAGTATT CCGTCCAATA CACGATAGAT CAAAACGATA ATTTTTACGA AATAATAGAT TTGAAAATTT ACAACAATAA TTCAGACGAT TTATACGATA TCAGCTACAG TATTCCCCAA GAAACTTCAG ATTTAACGTT TAATTCTTCA AAAGGAATTG ATTCTTATTC GATAACTACA AATGATGCAG GTGTGACTGA AGTTAATGTA AAATTGGATG AACCAATAGG TGCTTGGCAG AGCGGTGATT TATCGATCAG TTTTAACGGC CAGGTTTCCG ATCTTAGTGG AAAAAAACAG GTATATATCA TAGTTCCAGC GTATGATTCA AATTTCAAAG TTTCAGTGCA GCTTCCCGAG GGAGCGGCAA TAGTTTCTCC AGTAAAAGAT GTTTTGAGTA TAAATCCAAG GGATTACACG GTTGGAACGA ACGGTAAGAG TATATTTGTA GAATGGGAAA AGGAATTAAC TTCCGATGAG AAATATTTTG AAGTTACTAT AAATTATGTA ATGACTGCAA TAACTCCAGT AATTACAGAA GATAATAACG AAAATTTATA TCGTGCGATA AGCATTGTTT TGGGTGTGCT CGTAGTTGCA TTAATATTTT TTATATACCG AAATTATAAC AAGGTAAAAA TGATAAATGA ACTACAAAAC GAGATAATTG GATTAAATAA AGGGCTTGAA ATATCACAAC TCAATTTACA GAATAAAAAT AAAGAAATTC GAAGATTGGA AGAATTAAAC GACCACGTTT TAAAAGAATT GGATTTATCA AAGAACACGT TAACTGAATA TGAATCAAAA ATATCTGAAT TAAAAGAGAA AATCATGGAG TTCAAAGCTC AACTTGAAAA TTTTGCAAAA TTAAAGGAAG AAGTAATTTC AAAAGATTCA GAAATTAAAA ATCTAAGTTC TTACAAAAAA TTATCTGAAG AACTCAAAAT AAAAATTACG GAATTGAATG AAATTTTGGA AGAAAAAGAA GATTATATTT TGGAATTGAT GGGTAGAATC GGGGATTACG AGTCCCATAA AAGTGAAACA TTGATGAATA TTCTAACCGA CGATGAAAAA GGATTAATTG AATTAATTAG AGAACATGGA TCCATTTCTC AAAAAGAAAT TGTTGACATA ACGGGACTTA CTAAACCTAA AGTTTCAAGG ATGATTTCAG ATCTTGAACA GAGAGGAATG GTTAGAAAAG TAAAAATAGG AAGAATCAAC AAAATTGCTA TTTCAGAAGA TTTAGATGGA TCAATTTAA
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Protein sequence | MSKPISTNYR IYLIIALIFC SISTVDSYRF DEYSVQYTID QNDNFYEIID LKIYNNNSDD LYDISYSIPQ ETSDLTFNSS KGIDSYSITT NDAGVTEVNV KLDEPIGAWQ SGDLSISFNG QVSDLSGKKQ VYIIVPAYDS NFKVSVQLPE GAAIVSPVKD VLSINPRDYT VGTNGKSIFV EWEKELTSDE KYFEVTINYV MTAITPVITE DNNENLYRAI SIVLGVLVVA LIFFIYRNYN KVKMINELQN EIIGLNKGLE ISQLNLQNKN KEIRRLEELN DHVLKELDLS KNTLTEYESK ISELKEKIME FKAQLENFAK LKEEVISKDS EIKNLSSYKK LSEELKIKIT ELNEILEEKE DYILELMGRI GDYESHKSET LMNILTDDEK GLIELIREHG SISQKEIVDI TGLTKPKVSR MISDLEQRGM VRKVKIGRIN KIAISEDLDG SI
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