Gene MmarC7_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1392 
Symbol 
ID5327954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1354898 
End bp1355632 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content30% 
IMG OID640793950 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001330606 
Protein GI150403312 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTG TAATTACAAG ACCACTTGAA AAGGGTAAAG ATTTTTCCAG AATGCTTGAA 
GATGCAGGTT TTGAAACTGT AGTTATTCCC ACACTTGAAC TGGTTTTTAA AAAAGCTGAA
ATAAACCTTG AAAAGTATTC CTGGATAGTT TTTACAAGTC CGAGGGGAAT TGAAGGTTTT
TTTAAGAATT TAATTTCAAA AGATATTGAA AAAGTTTTAA CTAAAAAAAT AGGTGCAATA
GGAATTGAAA CTGCAAAAGA ATTTGAAAAA ATCTTTGAAA AACCTGTTGA TGTTATTCCA
GAATTATATA CTGCAGAACA TTTGCTTGAA GCACTTAAAA AAGAAGTTAA AACTGGTGAA
AAAGTACTTG TTCCAACAAC ACCCTCAACT AGAGATGTCT TAAAAGAAGG GTTAAATGCA
GACTTAATCT TTGTTTACAG CTCTGAAGAA CCAGAAAATA TATCTGAAAA ATTAGAAGAA
CTTGAAAAAC AGGTTGTTTC TGAAAATAAA AATAATAAAA AAGTAATTTT GACATTTACA
AGTGGACTTA CTGCAAAAAA CTTCTTTAAG CACTGCACTC CAGAATTTTT AGAAGTTTTA
AAAGAACAGT ATATAATATC AATTGGCCCG ATAACCAAGA AAAACGTTGA TTCGTTTGGA
TTTGATTCTT TGATGCCTGA AAAAAATTAT ACTGTTGAGG GAATGCTTTC CATAATTAAA
GCTTTAAATA TCTGA
 
Protein sequence
MKVVITRPLE KGKDFSRMLE DAGFETVVIP TLELVFKKAE INLEKYSWIV FTSPRGIEGF 
FKNLISKDIE KVLTKKIGAI GIETAKEFEK IFEKPVDVIP ELYTAEHLLE ALKKEVKTGE
KVLVPTTPST RDVLKEGLNA DLIFVYSSEE PENISEKLEE LEKQVVSENK NNKKVILTFT
SGLTAKNFFK HCTPEFLEVL KEQYIISIGP ITKKNVDSFG FDSLMPEKNY TVEGMLSIIK
ALNI