Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1392 |
Symbol | |
ID | 5327954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1354898 |
End bp | 1355632 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640793950 |
Product | uroporphyrinogen III synthase HEM4 |
Protein accession | YP_001330606 |
Protein GI | 150403312 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTG TAATTACAAG ACCACTTGAA AAGGGTAAAG ATTTTTCCAG AATGCTTGAA GATGCAGGTT TTGAAACTGT AGTTATTCCC ACACTTGAAC TGGTTTTTAA AAAAGCTGAA ATAAACCTTG AAAAGTATTC CTGGATAGTT TTTACAAGTC CGAGGGGAAT TGAAGGTTTT TTTAAGAATT TAATTTCAAA AGATATTGAA AAAGTTTTAA CTAAAAAAAT AGGTGCAATA GGAATTGAAA CTGCAAAAGA ATTTGAAAAA ATCTTTGAAA AACCTGTTGA TGTTATTCCA GAATTATATA CTGCAGAACA TTTGCTTGAA GCACTTAAAA AAGAAGTTAA AACTGGTGAA AAAGTACTTG TTCCAACAAC ACCCTCAACT AGAGATGTCT TAAAAGAAGG GTTAAATGCA GACTTAATCT TTGTTTACAG CTCTGAAGAA CCAGAAAATA TATCTGAAAA ATTAGAAGAA CTTGAAAAAC AGGTTGTTTC TGAAAATAAA AATAATAAAA AAGTAATTTT GACATTTACA AGTGGACTTA CTGCAAAAAA CTTCTTTAAG CACTGCACTC CAGAATTTTT AGAAGTTTTA AAAGAACAGT ATATAATATC AATTGGCCCG ATAACCAAGA AAAACGTTGA TTCGTTTGGA TTTGATTCTT TGATGCCTGA AAAAAATTAT ACTGTTGAGG GAATGCTTTC CATAATTAAA GCTTTAAATA TCTGA
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Protein sequence | MKVVITRPLE KGKDFSRMLE DAGFETVVIP TLELVFKKAE INLEKYSWIV FTSPRGIEGF FKNLISKDIE KVLTKKIGAI GIETAKEFEK IFEKPVDVIP ELYTAEHLLE ALKKEVKTGE KVLVPTTPST RDVLKEGLNA DLIFVYSSEE PENISEKLEE LEKQVVSENK NNKKVILTFT SGLTAKNFFK HCTPEFLEVL KEQYIISIGP ITKKNVDSFG FDSLMPEKNY TVEGMLSIIK ALNI
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