| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1368 |
|---|
| Symbol | |
|---|
| ID | 5329191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1331472 |
|---|
| End bp | 1332305 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640793924 |
|---|
| Product | F420-dependent methylenetetrahydromethanopterin dehydrogenase |
|---|
| Protein accession | YP_001330582 |
|---|
| Protein GI | 150403288 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1927] Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000884222 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTAA AAATAGGTAT TTTAAAATGT GGAAACATAG GAATGTCCCC TGTAGTTGAT
CTTTGTTTAG ACGAAAGAGC AGACAGAAAC GACATTGACG TTAGAGTTTT AGGTAGCGGA
GCTAAAATGG GCCCTGAACA AGTAGAAGAA GTTGCTAAAA AAATGGTTGA AGAAGTAAAA
CCAGACTTCA TTGTATACAT TGGTCCAAAC CCTGCTGCAC CAGGTCCAAA AAAAGCTAGG
GAAATCTTAA GCGCAGGCGG AATCCCAACA GTTATCATTG GTGATGCACC AGGTATTAAA
GACAAAGACG CTATGGCAGA AGAAGGACTC GGATACGTTT TAATCAAATG CGACCCTATG
ATCGGTGCTA GAAGACAGTT CTTAGACCCT GTTGAAATGG CAATGTTCAA CGCTGATGTA
ATCAGAGTTT TAGCAGGAAC AGGTGCTTTA AGAGTTGTTC AAAACGCTAT TGATGACATG
GTATTTGCAG TTGAAGAAGG AAAAGAAATA CCATTACCAA AAATCGTAAT CACCGAACAA
AAAGCAGTTG ACGCAATGGA CTTTGCAAAC CCATACGCAA AAGCAAAAGC TATGGCTGCA
TTTGTAATGG CTGAAAAAGT AGCTGACATC GATGTTAAAG GATGCTTCAT GACCAAAGAA
ATGGAAAAAT ACATCCCAAT CGTTGCATCT GCACACGAAG CAATAAGATA CGCTGCAAAA
TTAGTTGACG AAGCTAGAGA ATTAGAAAAA GCAACTGATG CTGTTTCAAG AAAACCTCAC
GCAGGCGAAG GAAAAATCTT AAACAAATGT AAATTAATGG CAAAACCAGA ATAA
|
|---|
| Protein sequence | MVVKIGILKC GNIGMSPVVD LCLDERADRN DIDVRVLGSG AKMGPEQVEE VAKKMVEEVK
PDFIVYIGPN PAAPGPKKAR EILSAGGIPT VIIGDAPGIK DKDAMAEEGL GYVLIKCDPM
IGARRQFLDP VEMAMFNADV IRVLAGTGAL RVVQNAIDDM VFAVEEGKEI PLPKIVITEQ
KAVDAMDFAN PYAKAKAMAA FVMAEKVADI DVKGCFMTKE MEKYIPIVAS AHEAIRYAAK
LVDEARELEK ATDAVSRKPH AGEGKILNKC KLMAKPE
|
|---|
| |