Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1354 |
Symbol | |
ID | 5329260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1313928 |
End bp | 1314926 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 640793910 |
Product | hypothetical protein |
Protein accession | YP_001330568 |
Protein GI | 150403274 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.503856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000556659 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAAAAAT ACATTAAATA TTTATTACTT GCAGTTATTG GCACAGTATT TTTGTCCCTT CCAGCTGGAA TTCCAATGAT AAAATCATAT AGCGAATACA GTAGTTTTAA TACAGATTGG GATGGTTGCT CGAAATTTAC CAAACACATT TATGATTCAG AAATTAGAAT AACTCCAATA TATTCTCCCT ATGAAGATTA TAAATTTGAT AAAAATGGTA TTTTGTTTAT AATTGGCCCC GAAATTGGTT TTTCAGATTT TGAAATTGAA AAGATTGGAA ATTTTGTTAA AGATGGAAAT ACCATTATAA TTGCAGATGA TTTTGGAACT TCAAACCTGA TTCTTGAAAA ATTAGATTTA CCAAATAAAT TTACTAAAAA TAAGCTAAAT GACATTTTTT ACATTTCAAA TGAAAATTTA ATAGAATACA ACGTTTCAGA ATATTATGGT GGAGGAGTTG TAGTTACGAA TATTCCGACA TATACTGCTA AAGAAGGCGT TGTTACTACA AGTAATTTTT CAAAATCAGG TTCAAAAATA GGCTCCTTAT CGCTAATTTC CGAAATAAAT TATGGAAATG GAAAAATAAT ATTGATAGCG GATCCAGATA TATTTACAAA TGGATTATAT GAATACAACC AGAATTTCCT CGAAAATTTC ATTGCTAAAT TAAATTCAAA CCATATTTAT ATTGATGAAA TACACCATAA AGACTTTGGA TATGAAATAA ATGTTTTATA CATTCAAAAA TCAGTTCCAA AAGAATTTAC TCTAGTTTTA ATGTTAATAT TGATTAGTTT ATTTCATATT AGTAATAAAA AGTTATTTAA TGGTAAAACC AAAAAACTAA TTTCAAAATT TGCGAAAAAA AGAAAGGAAA ATGAAGAAGG AATATTGGAA GATATTTCAG AAAATCACGG CATTGATTTA AATGATTTAA AAAGAGTAAT TAAAAATATA AAAGATGGTA ACAATGGAAG GAAAAGAATT ACTAAGTAA
|
Protein sequence | MEKYIKYLLL AVIGTVFLSL PAGIPMIKSY SEYSSFNTDW DGCSKFTKHI YDSEIRITPI YSPYEDYKFD KNGILFIIGP EIGFSDFEIE KIGNFVKDGN TIIIADDFGT SNLILEKLDL PNKFTKNKLN DIFYISNENL IEYNVSEYYG GGVVVTNIPT YTAKEGVVTT SNFSKSGSKI GSLSLISEIN YGNGKIILIA DPDIFTNGLY EYNQNFLENF IAKLNSNHIY IDEIHHKDFG YEINVLYIQK SVPKEFTLVL MLILISLFHI SNKKLFNGKT KKLISKFAKK RKENEEGILE DISENHGIDL NDLKRVIKNI KDGNNGRKRI TK
|
| |