Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1330 |
Symbol | |
ID | 5329204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 1293015 |
End bp | 1293821 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640793883 |
Product | hypothetical protein |
Protein accession | YP_001330544 |
Protein GI | 150403250 |
COG category | [S] Function unknown |
COG ID | [COG1967] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.394918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGGGA TGCTTTTAAT TAGGGAATTT ATTTACAGAT ACTATATTTA CCCGATAGAT ACCAAACAGG GTTATAATTT AATTCAAGAA ATTACTTACG GAATTTTACT CTTTGTAATG GTTTATACTT TTTACCAAGT ATGTTTAAAA CTTAAAATAG CAATCGACCG CAGATTTGCA GAAGTTACCG TATTTTATGT GATTTTGATA ACGTTAATGA GAGCGCTGGT TGATGCAGGA CTATTTCCAA GGCTTTATTA TACTGTTACG CCCGGAATAG TTGTTACAAT TGGTCTTTAT TACATGCTTT CAATAATAAT TTCAGGAATT CTTTTAAAAA AGAAGTATTA TCTACTTTCA ATAGCAATGG CAGTTGTACC AATTTTGTAC ATGCTTTTCG AGTTTTCGAG TAGAATAACT CATCCAGAAG CGCTTGTTTA CGTTTCTGGA ATTTTGATTA CAAGCTATTA TGCGCTTGTA TATATTGTTG AAAAGCTAAG AAAAGTAAAA ATTGAGAGAA TAGACAAATA TGCGATATTT TCACAGCTTG TAGATGCATC TGCAACATCT GTTGGAATTG GTGTGTTCGG GTATTGGGAA CAGCACCCTG TACCAAGACT TTTCATGGAT TATCTTGGCC CATACAGTAT AATACCATTA AAAATGCTTG TAGTACTCTT GGTTTTAGAT ATATTTAACA AAGAAGTTAA AGATGATAAT TTAAGGAATA TTTTAAAAAT AACAGTAATG GCTCTCGGAC TTGCGCCGGG TCTTAGAAAC TTGTTCAGGA CAGTTATGGG AGTTTAA
|
Protein sequence | MNGMLLIREF IYRYYIYPID TKQGYNLIQE ITYGILLFVM VYTFYQVCLK LKIAIDRRFA EVTVFYVILI TLMRALVDAG LFPRLYYTVT PGIVVTIGLY YMLSIIISGI LLKKKYYLLS IAMAVVPILY MLFEFSSRIT HPEALVYVSG ILITSYYALV YIVEKLRKVK IERIDKYAIF SQLVDASATS VGIGVFGYWE QHPVPRLFMD YLGPYSIIPL KMLVVLLVLD IFNKEVKDDN LRNILKITVM ALGLAPGLRN LFRTVMGV
|
| |