| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1329 |
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| Symbol | |
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| ID | 5329203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 1291404 |
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| End bp | 1292921 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640793882 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001330543 |
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| Protein GI | 150403249 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase
[TIGR03327] AMP phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.237717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTTT TAAATGCAAA ATTTATAGAC CTTGATCTTG GAGAAAGTGC GGTAATTGTC
AACGAAGAGG ACTTAAAAGG AACTTCGTAC TACCCGCAGG ATAGGGTACT GATAGAGTCA
CACGCAGGTT CTGTCATTGG AAACATTTAT TCCACAAAAA CCATGGTTCA AAAAGGCGAA
GTTGGAATGC TTGTAAGTGA ACTTTCGGAA ATTTCAATTT CAGAAGGTGA AGAAGTAAAA
TTAAGACACG CAGAAAAACC CGAATCAATT CCATTTATAA AAAAGAAAAT GGATGGTCAA
GTTTTAAATC CTCATGAAAT AAGAACGATA ATTGATGAAA TCGTATCTAA AAAACTCTCA
AACATTGAAT TATCTGCATT TGTTTCATCT ACTTACATTA ATGGCATGAA TATGGATGAA
ATAAGCGAAA TGACCAAGAG AATTGCAGAA ACTGGGGATA TGATTTCTTG GGAAAAGAGC
CTTGTTGTAG ATATCCACAG CATTGGTGGA GTTCCTGGAA ACAAATATGC TCTACTTTCA
ATTCCGATAC TCGCAGCAGC AGGAATTACA GTTCCAAAAA CATCATCAAG GGCGATAACA
TCCCCTGCAG GAACTGCAGA CGTAATGGAA GTGCTTACAA ATGTTGAATT AAAGGAAGAA
GAGATAAAAA GGATAGTTAA AACTACAAAT GGATGTCTTG CATGGGGTGG AGGCGTAAAT
TTGGCCCCAG CAGATGATAT TATCATAAAT GTGGAAAGGC CTGTTTCAAT AGATCCACAA
CCTCAACTTC TTGCAAGTGT TATGGCAAAA AAGATTGCAA CTGGAATTAA ATATACTGTA
ATTGATATTC CTGTTGGAAA AGGCGTAAAA ATTAAAAATG AAGCCGAAGG GGCAAAATTA
GCAAGGAAAT TTATTGAACT TGGAGAAATG CTCAATATTA AAGTAGAGTG TGTATTAACT
TATGGTGGAC AGCCTCTTGG TAGGGCAATC GGTCCTGCAC TTGAAGCAAA AGAGGCAATT
GAATCACTTC AGGATCCAAA AAATGCTCCA AAAAGTTTAA TTGAAAAATC CTTATCTCTT
GCAGGAATTC TTCTTGAACT TGGCGGTGCT GCACAGATTG GGGAGGGTCA GAATTTGGCA
TGGGAAATTT TAGAATCTGG AAAAGCGCTT GAAAAATTCA ATCAAATTAT AGTTGAACAA
GGCGGAACTC CAAAAAAACC TGAAGAAATA GAACTTGGAG AATATGTTGA AGAGATTCTT
GCTCCAATTG ATGGATATAT TACAGATATA AGTAACACTG CAATTACAAA CGTGGTTAAG
GAAGCTGGAG CTCCAAGGGA CAAAAAAGCA GGAATTTTAT TGAATTCAAA GATTGGAAAC
AAAGTTACTC AGGGGGATGT GCTGTATACA ATCTATTCAG GTTCCGAAGA AAGGCTCATT
TCAGCAGTAA ATCTTGCAAG AAGAGTTTAT CCTGTAAAGG TAGAAGGAAT GCTTATTGAA
AGAATAAGCA AATTCTAA
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| Protein sequence | MLFLNAKFID LDLGESAVIV NEEDLKGTSY YPQDRVLIES HAGSVIGNIY STKTMVQKGE
VGMLVSELSE ISISEGEEVK LRHAEKPESI PFIKKKMDGQ VLNPHEIRTI IDEIVSKKLS
NIELSAFVSS TYINGMNMDE ISEMTKRIAE TGDMISWEKS LVVDIHSIGG VPGNKYALLS
IPILAAAGIT VPKTSSRAIT SPAGTADVME VLTNVELKEE EIKRIVKTTN GCLAWGGGVN
LAPADDIIIN VERPVSIDPQ PQLLASVMAK KIATGIKYTV IDIPVGKGVK IKNEAEGAKL
ARKFIELGEM LNIKVECVLT YGGQPLGRAI GPALEAKEAI ESLQDPKNAP KSLIEKSLSL
AGILLELGGA AQIGEGQNLA WEILESGKAL EKFNQIIVEQ GGTPKKPEEI ELGEYVEEIL
APIDGYITDI SNTAITNVVK EAGAPRDKKA GILLNSKIGN KVTQGDVLYT IYSGSEERLI
SAVNLARRVY PVKVEGMLIE RISKF
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