Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1318 |
Symbol | |
ID | 5328736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1277684 |
End bp | 1279522 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640793871 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_001330532 |
Protein GI | 150403238 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATAATA AGCATTTTTT AATGGGAAAT GAAGCGATTG CATATGGAGC AATTGCTGCA GGATTACAGT TTGCAACAGG GTATCCAGGA ACTCCTTCAA CAGAAGTTAT GGAAACTCTG ATTAAAAATG CAAAAAAATA TAATTTCTAT GCTGAATGGT CTACGAATGA AAAAGTAGCA TTGGAAACTG CAATTGGTGC ATCATTTTCA GGTGCAAGTT CCATTGTAAC AATGAAACAG GTTGGCTTAA ACGTTGCATC AGATCCACTG ATGAGTTTAA CATATCTTGG AGTAAAAGGG CCGTTAGTCC TTTTAGTAAC TGATGATCCA GGACCTCATT CATCCCAAAC TGAACAAGAT ACCCGATCTT TTGGATTATT TTCAAATATT CCAGTACTTG ACCCATCAAA CTCGCAGGAA GCCTACGAAA TGACAAAATA TGCTTTTGAA ATTTCAAAAA AGTATGAAAC TCCAGTATTT CTTCGAACTA CGACAAGAGT TTCACACCGG TGTGATGATG TTGTACTGGA TGACTTAAAA CCCTCAAATG AAGATATAGA AGGATTTTCA AAAAGTTCCA GGTGGGTAAT ATTTCCAAAA TTAGCCGCGG AAAGACATCC AATTTTAGAA AAATTGCAAG AAACACTTTC AAAAGAATTT TCAAATTCAA AATTTAATTT TAAAACAGGA ACTGGAAAAA TTGGCATAAT AACTTCAGGA GCATCTTATC ACTACGTAAA TGAAGCTATC TCCAATAATA AAGACTTATT CTCAGTTTTA AAAATTGGAA CACCATATCC ATTCCCAGAA AAAAAAGTAA TTGAATTTAT AAACGATATT GAGTCGATAA TAGTAGTAGA AGAACTAGAT TCATATTTAG AAGATCAATT ACTCCAATTA TTTGGAAAAT ATGGTATTTC AAAGGCAGTT TACGGTAAGA AAAATAATAT ATTCCCTTAC TGTGGAGAAT ACGGCATCGA TATTGCAAAA GTTGGAATTA ACAAAGTTCT AGATATTTTA AAAATTCAAA GAATTGAAAT TCCCGAGAAA CTAATCTCTA AAAATGAAAT AATTCCCCTT CCAGTAAGGC CTCCAAATTT ATGTGCCGGA TGTATGCACA GGACTGTATT TTACGCATTT AAGGAAGTTT CAAAAGAATT AAAAAAACAA AACATTCAAA CTATATTTTC CGGAGATATT GGATGCTACA CGCTTGGAAA TGCTCCACCT TTGGAATTAA TAGATACCTG TCTTTGTATG GGTGCAGGAA TTAGTATTGC TGGCGGAATT TCAAGAACTA ATAAAAATTC AAAGAATGTC GCATTTATTG GGGATTCTAC ATTCTTCCAT TCAGGAATTC CTGCAGTAAT TAACGCAGTT TATAATAAAG CCGATGTTAC AATTGCAGTA TTGGATAACA GGACTACTGC GATGACTGGC CACCAGCCAC ATCCTGGAAC TGGAAAAACT GCTCTTGGAG AAGCTACAAA ATTGATAGAT ATTGAAGGAA TTTTAAAAAG CTGTGGAATT GAATTTGTAA AAACTGTATC TGCAGATGAT TTTTTAACCT GTAAAGAGAT TTCAAGAGCA GCTATTGACT ATAACGGCCC TTCTGCAGTT GTTTTCAGAG GAACTTGCGT TTCACTTGTT AAATCCACTA AAAAATGTAC GATTAATAAA AATAAATGTA CTGGGTGCAA GATCTGCGTT GAAAGACTTG GATGTCCTGC AATAACGTTA AATGGAGATA TTCCCGAAAT TATGGAAAAC TGTACTGGTT GCGGACTTTG TATGGCAGTA TGCCCTGTTG ATGCAATAAA AGAGGTTGAT GAACAATGA
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Protein sequence | MNNKHFLMGN EAIAYGAIAA GLQFATGYPG TPSTEVMETL IKNAKKYNFY AEWSTNEKVA LETAIGASFS GASSIVTMKQ VGLNVASDPL MSLTYLGVKG PLVLLVTDDP GPHSSQTEQD TRSFGLFSNI PVLDPSNSQE AYEMTKYAFE ISKKYETPVF LRTTTRVSHR CDDVVLDDLK PSNEDIEGFS KSSRWVIFPK LAAERHPILE KLQETLSKEF SNSKFNFKTG TGKIGIITSG ASYHYVNEAI SNNKDLFSVL KIGTPYPFPE KKVIEFINDI ESIIVVEELD SYLEDQLLQL FGKYGISKAV YGKKNNIFPY CGEYGIDIAK VGINKVLDIL KIQRIEIPEK LISKNEIIPL PVRPPNLCAG CMHRTVFYAF KEVSKELKKQ NIQTIFSGDI GCYTLGNAPP LELIDTCLCM GAGISIAGGI SRTNKNSKNV AFIGDSTFFH SGIPAVINAV YNKADVTIAV LDNRTTAMTG HQPHPGTGKT ALGEATKLID IEGILKSCGI EFVKTVSADD FLTCKEISRA AIDYNGPSAV VFRGTCVSLV KSTKKCTINK NKCTGCKICV ERLGCPAITL NGDIPEIMEN CTGCGLCMAV CPVDAIKEVD EQ
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