| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1301 |
|---|
| Symbol | |
|---|
| ID | 5329621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1266282 |
|---|
| End bp | 1266866 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640793854 |
|---|
| Product | 50S ribosomal protein L15e |
|---|
| Protein accession | YP_001330515 |
|---|
| Protein GI | 150403221 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1632] Ribosomal protein L15E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.24879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGT ACAACTACGT GAAAGAAGCA TGGAAAGTAC CTGCTAACTC ATACGTTAAA
GAGTTACAAT GGTCAAGAAT GCAAGACTGG AGAAAAGAAC CTTCAGTTAT TAGAGTTGAA
AGACCTACAA GAATTGATAG GGCTAGAAAC TTAGGATACA AAGCAAAACA AGGAATTGTT
GTTGTAAGAG TTAGTGTTAG AAGAGGAGGT TTAAGAAAAC CAAGACCAAA ACACTCCAAA
AAACCTTCAA CATTAGGTAT CAACAAAATT ACAATGGCAA AATCCATTCA AAGAATTGCT
GAAGAAAGAG CAGCTAAAAA ATACCCTAAC TTGGAAGTAT TAAACTCTTA CTGGGTAGGA
CAAGATGGAA AACAAAAATG GTACGAAGTA ATCTTAGTTG ATTCATGCCA TCCGTCAATC
AAAAGCGACA AATCCTACAA CTGGCTCTGC AAAGGAACCC ACAAAGGTAG AGCAACCAGA
GGTTTAACCT CAGCTGGTAA AAAAGGAAGA GGATTAATGT ACAAAGGAAA AGGTACTGAA
AAAGTAAGGC CAAGTGTCAG AGCTAACAGC AAAAAAGCGA AATAA
|
|---|
| Protein sequence | MSMYNYVKEA WKVPANSYVK ELQWSRMQDW RKEPSVIRVE RPTRIDRARN LGYKAKQGIV
VVRVSVRRGG LRKPRPKHSK KPSTLGINKI TMAKSIQRIA EERAAKKYPN LEVLNSYWVG
QDGKQKWYEV ILVDSCHPSI KSDKSYNWLC KGTHKGRATR GLTSAGKKGR GLMYKGKGTE
KVRPSVRANS KKAK
|
|---|
| |