| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1297 |
|---|
| Symbol | |
|---|
| ID | 5329290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1262473 |
|---|
| End bp | 1263441 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640793850 |
|---|
| Product | Pyrrolo-quinoline quinone |
|---|
| Protein accession | YP_001330511 |
|---|
| Protein GI | 150403217 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1520] FOG: WD40-like repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.315704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGTG GGGGCGTAAA TGATTGTAAA ATTAAATGGG AATTTTTGAT CGGAAATAGT
ATCGATTCAA GCCCTATTCT TTCTAAAAAC GGAACCGTAT ATGTTGGTTC AGGCGATAAA
AATCTTTATG CAATAAATCC TGATGGGTCT GTAAAGTGGT CTTTTAAATC GGACGAAATA
ATTGAGTGCA AGCCATCCAT TGGTAAAGAT GGAACAATTT ATTTTGGTTC AGATAAGGTC
TATGCAATAA ACCCCGACGG AACTGAAAAG TGGAAATTTG GTACAAAAAA AGCAATAGCA
TCCGACTTTA CGATTTTTGA AGACGTACTT TATGTAACGT CCCTCGATGG TTATCTCTAT
GCAATAAACC CCGACGGAAC TGAAAAGTGG CGTTTTAAAA CCAATAGGGC AATATATGCA
ACACCCATAG TTTCAGAAGA TGGAACAATT TATGTTGGAT CAAATGACAA TTATCTCTAT
GCAATAAACC CCGACGGAAC TGAAAAGTGG CGTTTTAAAA CTAATGATAC AATAACTTCT
GCAGTATCCA TTGGTAAAGA TGGAACAATT TATTTTGGTT CAGATAAGGT CTATGCAATA
AACCCCGACG GAACTGAAAA GTGGAAATTT TATGCTGGAT ACTGGATTGT TACAAGGCCT
GCAATTTCAG AAGATGGAAC GATCTATGTA ACGTCCCTCG ATGGTTATCT CTATGCAATA
AACCCCGACG GAACTGAAAA GTGGCGTTTT AAAACGGATA AACGTATAGA ATCTTCCCCC
GTAATTGGAA ACACCGGAAC AATTTATTTT GGTTCATATG ATGGTCATTT ATACGCAATA
AACCCCGACG GAACTGAAAA GTGGAATTTT CAAACGGGAA GCTGGATAAT AGCTACTCCA
ACAATAGATA AAAACGGAAC AATCTATTTT GGGACAAGAA ATGGAAAATT CTACGCATTA
TTTAATTAA
|
|---|
| Protein sequence | MLRGGVNDCK IKWEFLIGNS IDSSPILSKN GTVYVGSGDK NLYAINPDGS VKWSFKSDEI
IECKPSIGKD GTIYFGSDKV YAINPDGTEK WKFGTKKAIA SDFTIFEDVL YVTSLDGYLY
AINPDGTEKW RFKTNRAIYA TPIVSEDGTI YVGSNDNYLY AINPDGTEKW RFKTNDTITS
AVSIGKDGTI YFGSDKVYAI NPDGTEKWKF YAGYWIVTRP AISEDGTIYV TSLDGYLYAI
NPDGTEKWRF KTDKRIESSP VIGNTGTIYF GSYDGHLYAI NPDGTEKWNF QTGSWIIATP
TIDKNGTIYF GTRNGKFYAL FN
|
|---|
| |