| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1280 |
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| Symbol | |
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| ID | 5329492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 1246563 |
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| End bp | 1247705 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640793833 |
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| Product | TraB family protein |
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| Protein accession | YP_001330494 |
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| Protein GI | 150403200 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.999223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATATAA GGGTTAACAA TGGCGTTACA GAATGTGACA TCAGATTGGT CGGAACTGCA
CACGTATCTG ATGATAGTAT TACGGATGTA GAGAATGCTA TCGTCGAAAC AGATCCGGAA
TTAGTAGCTA TTGAATTAGA TAAAGACCGA TTTGTAGCCA TGTTTCAAAA CAAAAAAAAT
GACGTGGATT TAAAATCAGT CATAAAACAG GGAAAAGTAG GAATATACAT AGTGCACTCC
ATCTTAGCAA ACTTCCAGAA AAATATCGGA GAACAGTTTG GGATAAAACC TGGAAGTGAA
ATGAAAAAAG CCACCGATCT TGCGATACAA TACGGAAAAC CACTTTCGCT AATAGATAGG
CCGATAAACA TTACTTTGTC AAGAACCATC AACAAAATGA CTTTTAAAGA AAAATTTGAT
TTTTTAATCG GACTTTTAAC AGAACAAAAC ATTGAATTGG ACGAAAAAGC AGTCAATGAA
ATGGTAACAA ACGCGGATGA TTTAATTTTA CTTTTAAAAG ATATTTCTCC ATCAATTTAC
GAAACTCTCG TTGATGAGAG AGATAGATAT ATGGCAAAAA ACCTCTTTGA ATCGAGCAAA
GGAAAAGAAA ACATTGTTGC AGTAGTTGGT GCAGGCCACG TTCCAGGAAT TAAAAATTAC
CTCAAACAAA TGGAATCCGG AGAAGATATC GACTTAAAAT CTTTAATGGA AGTAAAAAAA
AAGTCAAATG TTTTAGGTAA AATAATTTCA ATTGCGATTC TTTTGGTCAT ATTGTATGGA
TTTTACAGTG TATCATCAAA TCTTGAAGCA TTGAAAGCAT TAACATTAGA ATGGGTTCTG
ATAAATGGAT GTCTTTCGTC ACTTGGCGTT CTCATAGCCA GAGGTAAGCT TCAGACAATA
ATTGCGGCAT TTTTAGCTGC CCCAGTCACA TCATTAATAC CCGTGATCGG TGCAGGATAC
GTTGCAGGAT TAGTTGAGCT TAAATTTAGG GATGTTTCTT TTAACGATAT TGGAAAAATG
ATGAATACAG AAAATTTTAA AGAATTAATG GAAAATCAGG CGATGAGGGT TCTTTTGGTT
GCAGCTCTTG CAAATCTTGG GAGTGCAATT GGAACTTTCT ATTTTGTACC TAGATTTTTA
TAA
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| Protein sequence | MYIRVNNGVT ECDIRLVGTA HVSDDSITDV ENAIVETDPE LVAIELDKDR FVAMFQNKKN
DVDLKSVIKQ GKVGIYIVHS ILANFQKNIG EQFGIKPGSE MKKATDLAIQ YGKPLSLIDR
PINITLSRTI NKMTFKEKFD FLIGLLTEQN IELDEKAVNE MVTNADDLIL LLKDISPSIY
ETLVDERDRY MAKNLFESSK GKENIVAVVG AGHVPGIKNY LKQMESGEDI DLKSLMEVKK
KSNVLGKIIS IAILLVILYG FYSVSSNLEA LKALTLEWVL INGCLSSLGV LIARGKLQTI
IAAFLAAPVT SLIPVIGAGY VAGLVELKFR DVSFNDIGKM MNTENFKELM ENQAMRVLLV
AALANLGSAI GTFYFVPRFL
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