| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1272 |
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| Symbol | truA |
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| ID | 5329206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 1237163 |
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| End bp | 1237951 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640793825 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001330486 |
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| Protein GI | 150403192 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACATAT TTAAGATTGC ATACGATGGA AGATTAAGTT TTCAAACACA GCCTCACGGA
GAAACCGTCT GTGACAAAAT TTCAAATGCA CTTTTAGACT GTGGATATTT AGATGACAAG
GATAGGGTTC CGCTCTATCA CGGGGGAAGA ACTGATCGAG GAGTATCTGC ACTTGGAAAT
TACATTGTTT ACGAAATGGA CAAAAAACCG GTGCTCCCAA GAGTTCAGTC TAATCTTAAA
AAAGACGGAA TATGGGTTTT GGGATGTAAA GAGATCGATA CTTTTCCAGA AATAGAATAC
AGGCACTATC AGTACAACTT ACCGAATAAA AATCACGATG TCGAACTAAT GAAAAAGGCA
TCTGAAAAAC TTATCGGAAC ACACTATTTC CAGAATTTAT CAAAAAGGGA TAAAACAAAG
GTAAAGGATC CAGTCAGGAC ACTTCACGAC ATTAAAATAT CATCAAATGA CTATTTCATT
ACTATTGATA TTTTTGGGGA GAGTTTTCTT TGGAACATGG TTCGAAGAAT CATAAGACTC
CTTTCCGATG TTGGAAAACA CAAATTTGAA GATCCTGAAA AATTTATCGA ATTAATCCTG
TCAAAAGATT ACAACAAGGG TTACCCACCA TCCCCTGCCG AAGGTTTAAT ACTGGTCGAT
GTCAAAACTA ATATTGACGT TGATATTGAT AGTTATGTCC TTAGAATGTT GAAAAATAGC
TGGGAAAAAT CCCTGAATAA CAGTTTGATG AGACTTGGAC TCTGTAAAAC CGTTTTATCG
AAAACTTAA
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| Protein sequence | MYIFKIAYDG RLSFQTQPHG ETVCDKISNA LLDCGYLDDK DRVPLYHGGR TDRGVSALGN
YIVYEMDKKP VLPRVQSNLK KDGIWVLGCK EIDTFPEIEY RHYQYNLPNK NHDVELMKKA
SEKLIGTHYF QNLSKRDKTK VKDPVRTLHD IKISSNDYFI TIDIFGESFL WNMVRRIIRL
LSDVGKHKFE DPEKFIELIL SKDYNKGYPP SPAEGLILVD VKTNIDVDID SYVLRMLKNS
WEKSLNNSLM RLGLCKTVLS KT
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