Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1253 |
Symbol | |
ID | 5327834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1220865 |
End bp | 1221644 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640793806 |
Product | proteasome subunit alpha |
Protein accession | YP_001330467 |
Protein GI | 150403173 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACAAA TGGTTCCGGC ATCAGGATAC GATAGGGCAA TAACCATATT CAGCCCAGAA GGAAGACTTT ACCAGGTTGA ATATGCTAGA GAAGCAGTGA GACGAGGAAC CACTGCAGTT GGCATTAAGT GTAAAGACGG AGTAGTTCTC GCAGTTGATA GGAGAATTAC AAGCAAATTA ATCGACGTTT CTTCAATTGA AAAAATATTC CAGATTGACG ACCATATTGT AGCCGCTACA TCAGGTTTAG TTGCTGATGC AAGAGTTTTG ATCGATAGAG CAAGACTTGA AGCACAGATG AACAGGATTT CATACGGTGA AGCAATCACA GTTGAAGCAC TTGCTAAAAA AATCTGTGAC ATCAAACAGG CATACACCCA ACACGGTGGC GCAAGACCAT TTGGTTTAGC ACTTTTAATT ACTGGAATCG ACAGACACAG TGCAAGATTG TTTGAAACTG ACCCAAGTGG TGCTTTAATA GAATACAAAG CAACAGCAAT CGGTTCAGGA AGACCTATTG CAATGGAAGT TCTCGAATCA AAGTACGACG AAAATATGAC TGTTAACGAA GGAATGGAAT TGGCACTTTA CGCATTAAGC AAAACTACTG AAGAATTAAA GCCTGAAAAC ATTGACATGG CAATTGTAAA AGATTCTGGA AAATTAGTTG AAAAAATAAG TGTTGATGAA ATTGAAAAAA TTGTAAAAGC CGTTTACAAA AAAGTTGAAG CTGAAGAAGC AGAAGCTGAA AAAAATAAAG GCGAAGAAGA TATTGAATAA
|
Protein sequence | MQQMVPASGY DRAITIFSPE GRLYQVEYAR EAVRRGTTAV GIKCKDGVVL AVDRRITSKL IDVSSIEKIF QIDDHIVAAT SGLVADARVL IDRARLEAQM NRISYGEAIT VEALAKKICD IKQAYTQHGG ARPFGLALLI TGIDRHSARL FETDPSGALI EYKATAIGSG RPIAMEVLES KYDENMTVNE GMELALYALS KTTEELKPEN IDMAIVKDSG KLVEKISVDE IEKIVKAVYK KVEAEEAEAE KNKGEEDIE
|
| |