Gene MmarC7_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1253 
Symbol 
ID5327834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1220865 
End bp1221644 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content38% 
IMG OID640793806 
Productproteasome subunit alpha 
Protein accessionYP_001330467 
Protein GI150403173 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID[TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAA TGGTTCCGGC ATCAGGATAC GATAGGGCAA TAACCATATT CAGCCCAGAA 
GGAAGACTTT ACCAGGTTGA ATATGCTAGA GAAGCAGTGA GACGAGGAAC CACTGCAGTT
GGCATTAAGT GTAAAGACGG AGTAGTTCTC GCAGTTGATA GGAGAATTAC AAGCAAATTA
ATCGACGTTT CTTCAATTGA AAAAATATTC CAGATTGACG ACCATATTGT AGCCGCTACA
TCAGGTTTAG TTGCTGATGC AAGAGTTTTG ATCGATAGAG CAAGACTTGA AGCACAGATG
AACAGGATTT CATACGGTGA AGCAATCACA GTTGAAGCAC TTGCTAAAAA AATCTGTGAC
ATCAAACAGG CATACACCCA ACACGGTGGC GCAAGACCAT TTGGTTTAGC ACTTTTAATT
ACTGGAATCG ACAGACACAG TGCAAGATTG TTTGAAACTG ACCCAAGTGG TGCTTTAATA
GAATACAAAG CAACAGCAAT CGGTTCAGGA AGACCTATTG CAATGGAAGT TCTCGAATCA
AAGTACGACG AAAATATGAC TGTTAACGAA GGAATGGAAT TGGCACTTTA CGCATTAAGC
AAAACTACTG AAGAATTAAA GCCTGAAAAC ATTGACATGG CAATTGTAAA AGATTCTGGA
AAATTAGTTG AAAAAATAAG TGTTGATGAA ATTGAAAAAA TTGTAAAAGC CGTTTACAAA
AAAGTTGAAG CTGAAGAAGC AGAAGCTGAA AAAAATAAAG GCGAAGAAGA TATTGAATAA
 
Protein sequence
MQQMVPASGY DRAITIFSPE GRLYQVEYAR EAVRRGTTAV GIKCKDGVVL AVDRRITSKL 
IDVSSIEKIF QIDDHIVAAT SGLVADARVL IDRARLEAQM NRISYGEAIT VEALAKKICD
IKQAYTQHGG ARPFGLALLI TGIDRHSARL FETDPSGALI EYKATAIGSG RPIAMEVLES
KYDENMTVNE GMELALYALS KTTEELKPEN IDMAIVKDSG KLVEKISVDE IEKIVKAVYK
KVEAEEAEAE KNKGEEDIE