Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1252 |
Symbol | |
ID | 5327833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1220062 |
End bp | 1220766 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640793805 |
Product | putative RNA-associated protein |
Protein accession | YP_001330466 |
Protein GI | 150403172 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1500] Predicted exosome subunit |
TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGTCAT TGGACGATGC TGTTATAGCA AGGCTTCAAT CACATGGGGA AAAATTCGAA ATACTCGTGG ATCCATACTT GGCAGCTAAA TTTAAAGAAG GACAGCCAAT AGGCATCTCA GAAGTCTTGG CCGCTGAAGC GGTTTATAAA GATTCTGGAA AAGGAGAAAA AGTTCCAGAA GATTTACTTT TGAAGATTTT TGAAACCTTG AATCCTTTGG AAATCGCAGA ACAGATTCTA AAAAAAGGAA CTGTTCAGTT AACGGCTAAC CAGCGAAAAG AAATACAGGA ACAAAAGCGA AAGCAAATCG TGTCTTTAAT TTCGAAAAAC ACGATAAATC CTCAAACTGA CACTCCCCAC CCGCCGAAAA GGATTGAAAA CGCTATGGAA GAAGCTAGAA TCAGTGTTGA TATTTATAAA AGCGCTGAAG AACAAATTCC TAAAATTATT AAGGAATTGA GGAAACTTTT ACCCATTAAG TTTGAAAAAA GAGATGTTGC AGTTAAAATT CCCGGAGAAT TTGCTGCAAA TGCATACCAT ACACTTCATG AATACGGCGC AACCAAGCAG GAAGAGTGGA TGGGCGATGG CTCGCTTGTT CTTGTAATCG AAATTCCAAG TGGTATTGAA AGCGAATTTT ACATGCATTT GAACAAACTT ACAAAAGGAA CTGTTCAAAC TAAAGTACTT AAAAGATATG ACTAA
|
Protein sequence | MVSLDDAVIA RLQSHGEKFE ILVDPYLAAK FKEGQPIGIS EVLAAEAVYK DSGKGEKVPE DLLLKIFETL NPLEIAEQIL KKGTVQLTAN QRKEIQEQKR KQIVSLISKN TINPQTDTPH PPKRIENAME EARISVDIYK SAEEQIPKII KELRKLLPIK FEKRDVAVKI PGEFAANAYH TLHEYGATKQ EEWMGDGSLV LVIEIPSGIE SEFYMHLNKL TKGTVQTKVL KRYD
|
| |