| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1202 |
|---|
| Symbol | |
|---|
| ID | 5329572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1177639 |
|---|
| End bp | 1178460 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640793755 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001330416 |
|---|
| Protein GI | 150403122 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4902] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.696548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.814193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TAATTATGAC CTGTTTATCG GTATTTTTAG TTATTTTGGG GTCTTCATTT
GTATATGGGA ACCAGGGCAT GGGCTATGGG CAAAATCAGG GTGGTCAGGT CTATCAGTTA
TATGACGACA CACAGGTAAA TCATCAGCAA GAAATTGCCA TGTATCCTTT TGAAGAGTTG
AGTCAGCAAG AAATTGATGG ATTAATATTA ATGAGAGAAG AAGAAAAATT CGCAAGAGAC
GTTTATTTGG AATTATATGA TATTTGGGGC CAGCAAATTT TCTTAAATAT CGCAAATAGT
GAGAGTACGC ATACCAATGC AGTAAAATTG CTGCTGGATA AATATAATTT AACGGATTCA
GTTGCTGATG ATACAAGAGG AATCTTCACA AATCAAGATT TGGCACAGTT ATACAACAGT
TTAGTTGAAA AAGGATCAGT TTCGCTAATG GATGCTTTAA TGGTTGGTGC AACAGTTGAG
GACTTAGACA TATACGATTT ACAGAGATTG AACGAAATAT CCGATAATGA GGATATTAGT
GCAGTATATG GTAATTTAGA AAAAGGCTCA AGAAACCATT TAAGATCATT TACAAAAGTA
ATCGAAAGAA ATGGTGGAAC ATACGAGCCC CAGTACATTA GTCAATCAGA ATATGATGAG
ATTGTATCGG GTGATATGGA AACAGGTACT GAATATGGTG CGCCGGAAAA TTTATCAACA
CAAAATGGCC AATCTAACCA ATATCAAATT AATGATACAA GTTCAGAACC ACAAGGGGCA
TTTGCAAAGA TTTGGCAGGG CCTTATGAGA TGGCTTAGAT AA
|
|---|
| Protein sequence | MKRIIMTCLS VFLVILGSSF VYGNQGMGYG QNQGGQVYQL YDDTQVNHQQ EIAMYPFEEL
SQQEIDGLIL MREEEKFARD VYLELYDIWG QQIFLNIANS ESTHTNAVKL LLDKYNLTDS
VADDTRGIFT NQDLAQLYNS LVEKGSVSLM DALMVGATVE DLDIYDLQRL NEISDNEDIS
AVYGNLEKGS RNHLRSFTKV IERNGGTYEP QYISQSEYDE IVSGDMETGT EYGAPENLST
QNGQSNQYQI NDTSSEPQGA FAKIWQGLMR WLR
|
|---|
| |