| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1199 |
|---|
| Symbol | |
|---|
| ID | 5329564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1175789 |
|---|
| End bp | 1176508 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640793752 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001330413 |
|---|
| Protein GI | 150403119 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4827] Predicted transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.743786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATG AAATATGGCA ACTAGGACTT TTATCTGCAA TTATTATATT TGGTATAAAG
ATAGGACTTT CCCTGGGATT TGCGGGTCTT TCTAAAAAAG TATCTGCAGT TATAGTCTGT
TTATATGGGC TAGGCACCCT TTTGTTATCA AAATTAGCTG CTGGATACGC AGATGTTATT
AATACGGTTA TTTACGAATA CAATTTTGTT ATTTTTATGG TAATGTCGTT AACGATTCTG
TATGCAGGTT TTCACACGAT AAAAGAATGG AAGGTAAATC AGAAAAATTC GGTAGCTTCT
ACAAGTATTG CAATGATCGC ACCATGTCCG TGCTGTTTTG GAGCGGTTAT TGCATCGATT
GTATTAATTT CTCCATCACT GGGAGTTTCA ACATTTGAAA TTGGAAAATA TGCAAGTTTA
ATACTTATGA TAACCATAGG AACAGTTTAT CTACTTTCAG ATGCAATTTC GAGATTGATA
AAAGTACCAA GGCCAATCAT GATGGGAAAT TTCATGATTT TTGTGGGATT TTACTTTCTG
ATCTCTGCAC TGATGATACC AAACATCGTT GCTGGAATGA GTGTTCAGAT GAGTCCCATG
GAGTGCCCTG AATTTTCAAG TTTGGGACAT GTTTTTTTAA TAACATTTGG GCTTATGATA
CTTGGTTTTA TTAAAAACAA GCGGGAAATG AATTTTATAA ATAAAATGAG GTCGATTTAA
|
|---|
| Protein sequence | MVDEIWQLGL LSAIIIFGIK IGLSLGFAGL SKKVSAVIVC LYGLGTLLLS KLAAGYADVI
NTVIYEYNFV IFMVMSLTIL YAGFHTIKEW KVNQKNSVAS TSIAMIAPCP CCFGAVIASI
VLISPSLGVS TFEIGKYASL ILMITIGTVY LLSDAISRLI KVPRPIMMGN FMIFVGFYFL
ISALMIPNIV AGMSVQMSPM ECPEFSSLGH VFLITFGLMI LGFIKNKREM NFINKMRSI
|
|---|
| |