| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1180 |
|---|
| Symbol | |
|---|
| ID | 5328966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1150066 |
|---|
| End bp | 1150536 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640793735 |
|---|
| Product | riboflavin synthase |
|---|
| Protein accession | YP_001330397 |
|---|
| Protein GI | 150403103 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1731] Archaeal riboflavin synthase |
|---|
| TIGRFAM ID | [TIGR01506] riboflavin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0891579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.526732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTCA AAGTAGGCAT TGCAGACACG ACATTTGCAC GGGTCGACAT GGCATCTGCT
GCAATTAAAA AACTAAACGA AATGACTTCC AGTATTAAAA TAATAAGGTA CACTGTTCCG
GGAATGAAAG ACCTTCCTGT TGCATGTAAA AAATTGATGG AAGAACAGGG CTGTGAAATT
ACAATGGCCC TTGGAATGCC GGGTGGAAAG GATAAAGACA AAGTCTGTGC CCATGAAGCT
TCCCAGGGAT TGATGATGGC CCAATTACTT ACTAATAAAC ATATTATTGA AGTTTTTGTT
CATGAAGATG AGGCAAAAGA TGGAAAAGAA TTAGACTGGC TTGCAAAAAG AAGGGCTGAA
GAACATGCTG AAAACGTATA CTACATGCTT TTTAAACCGG AATTTTTGCA AAAAAGTGCG
GGTAAAGGTT TGAGACAGGG CTTTGAGGAT GCAGGAGCTG CAAGAAAATA A
|
|---|
| Protein sequence | MTVKVGIADT TFARVDMASA AIKKLNEMTS SIKIIRYTVP GMKDLPVACK KLMEEQGCEI
TMALGMPGGK DKDKVCAHEA SQGLMMAQLL TNKHIIEVFV HEDEAKDGKE LDWLAKRRAE
EHAENVYYML FKPEFLQKSA GKGLRQGFED AGAARK
|
|---|
| |