| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1176 |
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| Symbol | |
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| ID | 5328974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 1143090 |
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| End bp | 1145492 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640793731 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001330393 |
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| Protein GI | 150403099 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGACT TAGTAGTTGC AGAAGCCTAT CAGGGAGATG TAGGTAAAGG AATTGTAAGA
ATTGATCCAT TAACAATGGA AAAATTGTCG ATAAAAGCCG GAGATGCAAT AGAAATTGCA
GGAAAGGAAA AAACTTACGC GACTGTCTGG AGAGGTTACC TTGAAGACCA AGGTAAAGGT
ATCATACGAA TGGACGGCCT TTTGAGACAG AATACTAAAG CAGGTATTGG GGATAAGGTA
AAAATTACTG TAGTGGAAGT AAAAGAAGCT AAAAAGGTAA CTTTAGCTCC AATGCAAGCG
GTAAGATTCA GCACAGGATT TGAAAGTTAT GTTGGGAGCA GGCTTACAGA TCAGGTTGTA
GATAAGGGTT CAAGGGTAGT CATTGCAGTA CTTGGAACTG CATTTCCATT CATTGTAACA
GGTACCAATC CAAAAGGACC GGTAAAAATT AACGAATACA CTCAAATTGA GTTAAAAACT
GAACCTGTTA CAGAATTAAA AGAAACCAAA GTTCCAAATG TCACATACGA AGACATTGGT
GGTTTAAAAG AAGAAGTCAA AAAAATCAGG GAAATGGTAG AACTTCCAAT GAGACATCCT
GAATTATTTG AGAAACTAGG TATTGAACCT CCAAAAGGAG TTTTACTTGC AGGACCTCCA
GGAACAGGTA AAACATTGCT TGCAAAAGCT GTTGCAAATG AAGCAGGTGC TAATTTCTAC
ACGATCAATG GTCCTGAACT TATGAGTAAA TACGTCGGTG AAACCGAAGA AAATTTAAGA
AAAATATTTG AAGAAGCGGA AGAAAACTCG CCTTCAATTA TATTCATTGA CGAAATTGAT
GCAGTTGCTC CAAAAAGGGA TGAAGCAAGC GGTGAAGTTG AAAGAAGAAT GGTTGCTCAG
CTCCTGACAT TGCTTGACGG TCTAGAAGGT AGAGGTCAGG TCGTAATTCT TGCAGCTACA
AACAGACCTG ATTCAATCGA TATGGCGTTA AGAAGACCTG GAAGGCTTGA CAGGGAACTC
ACAATTGGAA TTCCTGACAG ACATGCACGA AACGAAATTT TACAGATACA TACAAGAAAT
ATGCCACTTC AACCAGATTA TGAGAAAGAT GAAGTAATTC CCCTATTAAA TGAACTTATC
GGGGAATTTG ACAGAAGTAA AATTGAAAAT ATAGTTAAAT TGGTTGAAAA AGTACCTTCA
GACGAAGAAA TTAAAAAACT CCCTGAAAAT ATTGAAAAAA TACCTTCTGG AGAACAGATC
GAAAAAATAC TCAAAGATGA AGATATAGAA GATAAAGTAA AAGTAAGATT AAACCAGATG
ATGGTAAAAG AACTTGCAGA CAAGACCCAT GGATTTGCAG GTGCTGATCT GGCTGCTCTT
TCAAAAGAAG CTGCTATGAA AACTTTGAGA AGATTGCTTC CTAATCTCGA TCTCGAAAAA
GAAGAAATTC CGCGAGAAGT ACTCGATAAT ATTAAAGTAA CTAAAAGCGA CTTCATGGGC
GGTTTAAAAG AAGTAGAACC TTCAGCATTA AGAGAAGTAT TGGTAGAAGT TCCAAATATC
AAATGGAGTG ATGTTGGTGG ACTTGAAGAC ATTAAACAGG ACTTAAAAGA AGCTGTTGAA
TGGCCAATTA AAAACAGGGA AATGTTTGAA AGAATGGGAA TAAGGCCTCC AAAAGGAGTA
TTACTCTTTG GTCCCCCAGG AACTGGTAAA ACACTCCTTG CAAAAGCTGT TGCAAACGAA
AGTGAAGCAA ATTTCATCAG CGTAAAAGGT CCTGAAATAT TCAGCAAATG GGTTGGAGAA
AGCGAGAAAG CGATCCGTGA AATCTTTAGA AAAGCACGAC AGGCTGCACC AACAGTCATT
TTCTTTGACG AAATTGACTC CATAGCTCCA AAAAGAGGAA TGAGCTTTGG CGGTAGCGGA
GTTAGCGAAA AAGTTGTAAA CCAGCTTTTA ACTGAACTCG ATGGTCTTGA AGAACCAAAA
GACGTTGTAA TTATTGCTGC AACAAACCGA CCAAACCTAT TAGATCCTGC ACTTTTAAGG
CCTGGAAGAC TCGATAGGAT TGTTTTGGTA TCCATTCCTG ATGAAAATGC AAGATTTGAA
ATATTTAAAG TTCACACAAA AGGAATGCCT ACTGGAAAAG ACGTGGATCT CCAAAAACTT
GCAAGAGAAA CTAATGGATA CACAGGTGCA GACATCGAAG CATTATGTAG AGAAGCTGCA
ATGATTGCAC TAAGAGAAGA CATCAATTCA AAACATGTTG AATTAAGGCA TTTTGAAGCA
GCGTTCAAAA GAATTGCTCC TTCGGTAAAA GATGAAGACA TGGAAGAGTA TAGGGACCTT
GCAAAAGAGT ATGGAAGAAC TACAGGAGTA TCTGAAATTG AAACTTCTGA AAATACTGAA
TAA
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| Protein sequence | MVDLVVAEAY QGDVGKGIVR IDPLTMEKLS IKAGDAIEIA GKEKTYATVW RGYLEDQGKG
IIRMDGLLRQ NTKAGIGDKV KITVVEVKEA KKVTLAPMQA VRFSTGFESY VGSRLTDQVV
DKGSRVVIAV LGTAFPFIVT GTNPKGPVKI NEYTQIELKT EPVTELKETK VPNVTYEDIG
GLKEEVKKIR EMVELPMRHP ELFEKLGIEP PKGVLLAGPP GTGKTLLAKA VANEAGANFY
TINGPELMSK YVGETEENLR KIFEEAEENS PSIIFIDEID AVAPKRDEAS GEVERRMVAQ
LLTLLDGLEG RGQVVILAAT NRPDSIDMAL RRPGRLDREL TIGIPDRHAR NEILQIHTRN
MPLQPDYEKD EVIPLLNELI GEFDRSKIEN IVKLVEKVPS DEEIKKLPEN IEKIPSGEQI
EKILKDEDIE DKVKVRLNQM MVKELADKTH GFAGADLAAL SKEAAMKTLR RLLPNLDLEK
EEIPREVLDN IKVTKSDFMG GLKEVEPSAL REVLVEVPNI KWSDVGGLED IKQDLKEAVE
WPIKNREMFE RMGIRPPKGV LLFGPPGTGK TLLAKAVANE SEANFISVKG PEIFSKWVGE
SEKAIREIFR KARQAAPTVI FFDEIDSIAP KRGMSFGGSG VSEKVVNQLL TELDGLEEPK
DVVIIAATNR PNLLDPALLR PGRLDRIVLV SIPDENARFE IFKVHTKGMP TGKDVDLQKL
ARETNGYTGA DIEALCREAA MIALREDINS KHVELRHFEA AFKRIAPSVK DEDMEEYRDL
AKEYGRTTGV SEIETSENTE
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