Gene MmarC7_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1135 
Symbol 
ID5328722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1101826 
End bp1102329 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content38% 
IMG OID640793690 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_001330352 
Protein GI150403058 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CTGTCGAAGG CAAAACATGG GTTTTTGGGG ATAATATCGA TACTGATGCG 
ATATTACCTG CAAGATACCT TGTATACACT ACCGAAGAAC AGCTTGCAAA ATACGCAATG
ACTGGAACCG ACCCAGAATT CCCGGAAAAA GCTACTGTTG GCGATATAAT CGTTGGCGGC
AAGAATTTCG GTTGTGGAAG TTCAAGAGAA CACGCCCCAA TTGGTTTGAA AGGTTTAGGA
ATATCAATGG TTATTGCAGA AAGTTTTGCA AGAATCTTTT ACAGAAATTC CATCAATATT
GGATTTCCAT TATTGGAATG TAAAGATATT TCAAAACACG TGAAAGAAGG CGACGTTTTA
AGAGTGGACC TTGATAAAGG CACTATTAAA AACGTTACAA CAGGCGATGA ATTAACTGGC
CAAAATCTTC CAGATTTCAT GATGGAAATC TTAAACAATG GTGGGTTAAT GCCACACTTG
AAGAAAAAGA TTTCAAAAGC TTAA
 
Protein sequence
MKKTVEGKTW VFGDNIDTDA ILPARYLVYT TEEQLAKYAM TGTDPEFPEK ATVGDIIVGG 
KNFGCGSSRE HAPIGLKGLG ISMVIAESFA RIFYRNSINI GFPLLECKDI SKHVKEGDVL
RVDLDKGTIK NVTTGDELTG QNLPDFMMEI LNNGGLMPHL KKKISKA