| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1130 |
|---|
| Symbol | |
|---|
| ID | 5328640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1096282 |
|---|
| End bp | 1097436 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640793685 |
|---|
| Product | L-tyrosine decarboxylase |
|---|
| Protein accession | YP_001330347 |
|---|
| Protein GI | 150403053 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAC AGGATATTTT AAAGGAATTA CGAAAATATA GGAGCCAGGA TTTAAAATAT
GAAGAAGGCT ACATTTTAGG CTCAATGTGC ACAAAACCAC ACCCAATGGC TCGAAAAATT
TCAGAAATGT TTTTTGAAAC AAATTTGGGG GACCCAGGAT TATTCAAAGG TACTTCAAAG
CTAGAAAAAG AAGTAGTTTC AATGCTCGGC GGTATTTTGC ATAATAATAA CGCTTTTGGA
TATATTATTT CTGGTGGAAC GGAAGCAAAC CTCACGGCAA TGAGGGCATT TAAAAATATC
TCAAAATCAA AAGATAAACA GCAAAATATT ATAATTCCTG AAACTGCACA CTTTTCTTTT
GATAAAGCAA GAGATATGAT GGATTTAAAC GTTGTAAGGC CCCCTTTAAC GGAATATTTT
ACAATGGATG TAAAATTCAT TCGAGATTAT ATTGAAGACT CTAAAAACGA AATTTCTGGG
ATTGTCGGGA TTGCAGGATG TACTGAACTT GGATCAATCG ATAATATCTA TGAATTATCC
AAAATTGCGG TTGAAAACGA TATTTTGCTC CACGTGGATG CTGCATTTGG CGGTTTTGTA
ATTCCATTTT TGGACGATAA ATACAAATTA AAAGGCTATA ATTACGATTT TGATTTTTCA
CTGAACGGAG TTTCTTCAAT TACCATAGAT CCGCACAAGA TGGGACTTGC TCCAATTTCT
GCGGGAGGAA TTTTATTTAA GAACAATACC TTTAAAAACT ATCTGGATGT TGATGCCCCG
TATTTAACTG AAAAACAGCA GGCAACATTA ATTGGAACTA GATCTGGAGT TGGAGTCGCG
TCCACTTGGG GAATTATGAA ATTACTTGGA ATTGATGGAT ACAAAAAACT TGTAAACGAA
TCGATGGAAA AAACAATGCA TTTGGTAAAA AAAGCCAGAG AATATGGTTT TGAAACTGCA
ATCGATCCAG TAATGAATAT TGTTGCACTA AAAGACGAAG ATAAACACGA TACCTGTATG
AAATTGCGAG AAGAGAACTG GTACGTTTCA GTTTGTAGGT GTGTCGAAGC ATTGAGAATT
GTTGTAATGC CGCATCTTGA AATCGAGCAT ATCGATGGAT TTTTGGAAAG CCTTTCAAAT
ACAAAAAAAT ATTAA
|
|---|
| Protein sequence | MDEQDILKEL RKYRSQDLKY EEGYILGSMC TKPHPMARKI SEMFFETNLG DPGLFKGTSK
LEKEVVSMLG GILHNNNAFG YIISGGTEAN LTAMRAFKNI SKSKDKQQNI IIPETAHFSF
DKARDMMDLN VVRPPLTEYF TMDVKFIRDY IEDSKNEISG IVGIAGCTEL GSIDNIYELS
KIAVENDILL HVDAAFGGFV IPFLDDKYKL KGYNYDFDFS LNGVSSITID PHKMGLAPIS
AGGILFKNNT FKNYLDVDAP YLTEKQQATL IGTRSGVGVA STWGIMKLLG IDGYKKLVNE
SMEKTMHLVK KAREYGFETA IDPVMNIVAL KDEDKHDTCM KLREENWYVS VCRCVEALRI
VVMPHLEIEH IDGFLESLSN TKKY
|
|---|
| |