| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1111 |
|---|
| Symbol | |
|---|
| ID | 5328142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1079560 |
|---|
| End bp | 1080840 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640793666 |
|---|
| Product | phosphonopyruvate decarboxylase-related protein |
|---|
| Protein accession | YP_001330328 |
|---|
| Protein GI | 150403034 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3635] Predicted phosphoglycerate mutase, AP superfamily |
|---|
| TIGRFAM ID | [TIGR00306] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACTT TGCTTGTATT ATTAGATGGG CTTGGAGATA GGCCTTCTTG TATTTTAAAC
GATAAAACTC CACTCGAATA TGCAAAAACT CCAAACTTAG ATGCTTTTGC GAAAAAAAGC
ATAACTGGGT TGATGACACC ATATAAAAGG GGCGTACCGC TTGGAACGGA AGTTGCCCAT
TTTTTACTAT GGGGATACAG TTTATCAGAA TTTCCTGGAA GGGGCGTTAT TGAAGCTTTA
GGCGAAGATA TTGAACCTAA AGATAATGCC ATTTATCTAA GGGCTACTTT TGGGTACGTG
GAAAGAAAAA ATGGATTTTT TGTAAAAGAC AGGCGCACTA AAAATGTTTC AACCAAAGAA
ATAAAACGCC TTATAGAGTC CCTTCCAAAA AAAATTGAAA ATTATGAATT TAAATTACAT
TATTCATTTG ATACACACTG TATTTTAGAA ATAACTTCTC CAAATTATGA AATATCTGAT
AAAATATCCG ATAGCGATCC ATTTTATCGA GAAAGGCATG TTTTGAAAAT AAAACCACTT
AATAATCTAC TAAAATCGTT AGAATTTGAA AATGCAAAAA AAACTGCCAA CATATTGAAC
GAATATCTTT TAAAATGTAA CGAAATTTTG GAAAACCACC CCCTAAATAT TGAACGAGAA
GAAAATGGAC TTCAACTTGC AAATTTCTTA CTTACAAAGT GGGCAGGTCA AAAAACTGAA
ATTGACTCAT TTAAAGATAG GTGGGGTATG AATGCTGCCA TAATTGCAAA AAGTAGCGTT
TTTAAGGGCC TGTCAAAATT GCTGAAAATG GATTACTATC CTGAAGGAGA TTTTCAAAAA
GCATTTTTAA AAGGAATTGA ATTAAAAAAT TACGATTTTG TACACATCCA TACCAAAGAA
CCCGATGAAG CAGCACATAC TAAAAATCCA GCTAATAAAG TTGAAGTTAT TGAAAAAATA
GATAAATGTC TTGAAAAGAT AAATAAATTA AACGAAGAGT TAATAATTGT TACGTCTGAC
CATTCTACGC CCTCTGTTGG AACATTAATC CATTCTGGAG AAGAAGTTCC GATTGCAGTA
TTTAAAAATG GAATTATAAC TGATTCAAAT AAATATTTTA ACGAAAAAGA ATGCTCAAAA
GGATATATAA AGATCGAATC AAAAGATTTG ATGAATTTAA TACTGCTTTA CACAAACAAA
GCGGCATTAT ATGATACAAG AATTGGAAAT AAATTTTTAA GATATATTCC AGACGATGAT
TCGATTGAAC ATTTGAGATA G
|
|---|
| Protein sequence | MRTLLVLLDG LGDRPSCILN DKTPLEYAKT PNLDAFAKKS ITGLMTPYKR GVPLGTEVAH
FLLWGYSLSE FPGRGVIEAL GEDIEPKDNA IYLRATFGYV ERKNGFFVKD RRTKNVSTKE
IKRLIESLPK KIENYEFKLH YSFDTHCILE ITSPNYEISD KISDSDPFYR ERHVLKIKPL
NNLLKSLEFE NAKKTANILN EYLLKCNEIL ENHPLNIERE ENGLQLANFL LTKWAGQKTE
IDSFKDRWGM NAAIIAKSSV FKGLSKLLKM DYYPEGDFQK AFLKGIELKN YDFVHIHTKE
PDEAAHTKNP ANKVEVIEKI DKCLEKINKL NEELIIVTSD HSTPSVGTLI HSGEEVPIAV
FKNGIITDSN KYFNEKECSK GYIKIESKDL MNLILLYTNK AALYDTRIGN KFLRYIPDDD
SIEHLR
|
|---|
| |