Gene MmarC7_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1109 
Symbol 
ID5329598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1078039 
End bp1079010 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content34% 
IMG OID640793664 
ProductABC transporter related 
Protein accessionYP_001330326 
Protein GI150403032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.79033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTAA AACTTGAAAA TGTTTCAAAA AACTTCGAAA AAAACACAGT TTTAAAAGAT 
ATTAATTTTG AGTGCGCTGA AGAACTGGTT TCTCTTGTTG GTTCCAGCGG GTGCGGAAAA
ACGACGTGTT TAAGGGTTAT AGCGGGGTTC GAAAAACCTG ATCAAGGCAG GCTTTTTTTG
AATGGCGAGG ATATAACAAA TATTCCACCA AATAAACGGA ATATTGGCAT GGTATTTCAA
AACTATGCAT TGTTTCCCCA TTTAACTGTT TTTGAAAATA TCGCATATGG TTTAAAGCTA
AAAAATCTTG GTAAATGTGA AATTTCTGAA AAAGTGAAAA ATTCAATAGA TATCATAAAT
TTAGGCGGGT ATGAAAAATA TTCCATTGAA GAATTGAGTG GGGGAATGCA GCAACGAGTT
GCGATTGCAA GAGCAATGGT AATTGAACCA AAAGCAATGC TTTTAGACGA ACCCTTAAGC
AATTTAGATG CAAAACTTAG GATAAAAATG AGAAAAGAGC TTAAAGAATT ACAAAGGAAT
TTGGGAATTC CAACGATTTA TGTGACACAT GACCAAGAAG AAGCACTTGC ATTATCGGAT
AAAGTCGCAG TAATGAATAA AGGGGAAATC GAACAGTTTG GAGAACCTTA TTCGGTTTAT
TCAAGCCCTA AAACAGAATT TGTCGCTAAA TTTATTGGGG TCGTCAATGA ACTCCCTCTT
TCAGTTATCG AGGAATTAAA TATTGAAAAT CACGCTGATA AAAAGTATTT TGTGAGGCCA
GAATCACTGG ATCTTGGTAA TGGAAAATTT CAGGGAAAAA TTTTAGATCG TGAATTCTTA
GGCAGTATTA CACGATATGT TATAAAACAC AGTGATTTTT TATTCACGGT TCAAACTAAT
ACTCCAACAG ATTTTAAAAT AGGGGACGAA ATTTCGTTTG ATATTGATAA AAACAGCATA
ATTTTAATTT AA
 
Protein sequence
MVLKLENVSK NFEKNTVLKD INFECAEELV SLVGSSGCGK TTCLRVIAGF EKPDQGRLFL 
NGEDITNIPP NKRNIGMVFQ NYALFPHLTV FENIAYGLKL KNLGKCEISE KVKNSIDIIN
LGGYEKYSIE ELSGGMQQRV AIARAMVIEP KAMLLDEPLS NLDAKLRIKM RKELKELQRN
LGIPTIYVTH DQEEALALSD KVAVMNKGEI EQFGEPYSVY SSPKTEFVAK FIGVVNELPL
SVIEELNIEN HADKKYFVRP ESLDLGNGKF QGKILDREFL GSITRYVIKH SDFLFTVQTN
TPTDFKIGDE ISFDIDKNSI ILI