Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1109 |
Symbol | |
ID | 5329598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 1078039 |
End bp | 1079010 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640793664 |
Product | ABC transporter related |
Protein accession | YP_001330326 |
Protein GI | 150403032 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.79033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTTAA AACTTGAAAA TGTTTCAAAA AACTTCGAAA AAAACACAGT TTTAAAAGAT ATTAATTTTG AGTGCGCTGA AGAACTGGTT TCTCTTGTTG GTTCCAGCGG GTGCGGAAAA ACGACGTGTT TAAGGGTTAT AGCGGGGTTC GAAAAACCTG ATCAAGGCAG GCTTTTTTTG AATGGCGAGG ATATAACAAA TATTCCACCA AATAAACGGA ATATTGGCAT GGTATTTCAA AACTATGCAT TGTTTCCCCA TTTAACTGTT TTTGAAAATA TCGCATATGG TTTAAAGCTA AAAAATCTTG GTAAATGTGA AATTTCTGAA AAAGTGAAAA ATTCAATAGA TATCATAAAT TTAGGCGGGT ATGAAAAATA TTCCATTGAA GAATTGAGTG GGGGAATGCA GCAACGAGTT GCGATTGCAA GAGCAATGGT AATTGAACCA AAAGCAATGC TTTTAGACGA ACCCTTAAGC AATTTAGATG CAAAACTTAG GATAAAAATG AGAAAAGAGC TTAAAGAATT ACAAAGGAAT TTGGGAATTC CAACGATTTA TGTGACACAT GACCAAGAAG AAGCACTTGC ATTATCGGAT AAAGTCGCAG TAATGAATAA AGGGGAAATC GAACAGTTTG GAGAACCTTA TTCGGTTTAT TCAAGCCCTA AAACAGAATT TGTCGCTAAA TTTATTGGGG TCGTCAATGA ACTCCCTCTT TCAGTTATCG AGGAATTAAA TATTGAAAAT CACGCTGATA AAAAGTATTT TGTGAGGCCA GAATCACTGG ATCTTGGTAA TGGAAAATTT CAGGGAAAAA TTTTAGATCG TGAATTCTTA GGCAGTATTA CACGATATGT TATAAAACAC AGTGATTTTT TATTCACGGT TCAAACTAAT ACTCCAACAG ATTTTAAAAT AGGGGACGAA ATTTCGTTTG ATATTGATAA AAACAGCATA ATTTTAATTT AA
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Protein sequence | MVLKLENVSK NFEKNTVLKD INFECAEELV SLVGSSGCGK TTCLRVIAGF EKPDQGRLFL NGEDITNIPP NKRNIGMVFQ NYALFPHLTV FENIAYGLKL KNLGKCEISE KVKNSIDIIN LGGYEKYSIE ELSGGMQQRV AIARAMVIEP KAMLLDEPLS NLDAKLRIKM RKELKELQRN LGIPTIYVTH DQEEALALSD KVAVMNKGEI EQFGEPYSVY SSPKTEFVAK FIGVVNELPL SVIEELNIEN HADKKYFVRP ESLDLGNGKF QGKILDREFL GSITRYVIKH SDFLFTVQTN TPTDFKIGDE ISFDIDKNSI ILI
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