| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1093 |
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| Symbol | |
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| ID | 5329316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 1062318 |
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| End bp | 1063727 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640793640 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_001330310 |
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| Protein GI | 150403016 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0712326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATAG ATTATTCTGT TTTAAAAAAA TACCCCTTGT GCGACAGATG TTTTGGAAGA
CTTTACGGAA AACTTATTAG ATCCAGTAAT TTTGAGAGAG GACATGCTTT AAAACTTGCT
AAAGCAATCG AACTTGAAGA AGATTTAAGA AATGCCCTTG AAAAAATGAA TGAATCTTCT
GAAAATTCTG ATAATCAAAT TAATCCTGAA AAATTGGAAG AAATTAAAGA ACTGATGTAT
TCCCTCTACA AATCAGGAAT TTCAGGAATA AAACTTGATT TAATTGAAGA TATTGAAAAA
TACGAAACAA AATTTAAAAA TGAAGCTGAA TATGAAAAAA CCGAAGAGTG TGAAGAACTC
TGCCCATGGT GTAAAGGAAT TTTTGAAATT GAAAATATTG AAAAAGTTGC TGAAAATGTA
GTTGATGCAC TTTCTGAATA CGAATTTGAC AGCTTTTTAA TCGGTACAAA ACTTCCAAAA
AGATTTAAAG AACTTGAAAA TGAGATTGAA ACTCCATTTA TGGAAAGTAT AAGGCAGGAA
TTTGGAAGAG AACTTGGAAA AGTAGTAGTA CCATTAGTTA AAAGACGAGT TGACAAGGAA
AATCCTGATA TCGTAGTCAT GGTAAATCCA TACAATCAAA AAGTTACACT TCAAGTAAAC
CCCGTATTTA TCAAAGGAAG ATATAAAAAG CTAGTTAGAG GAATTCCGCA AAGCCACTGG
CATTGCAGGT CTTGCAAAGG AAAAGGCTGT GAAAAATGTA ACTTCACTGG AAAACAGTAC
ATGACTTCAG TTGAAGAAAT CATTGCAGAA CCGTTTATGG ATGTTATGAA AGGAAGTTCA
GAAGCACTTC ACGGTGCAGG GCGAGAAGAC ATTGATGTTA GAATGCTTGG AAATGGAAGG
CCTTTTGTAA TTGAAATAAA AGAGCCAAAG GTAAGAAAAG TTAATTTAGA AGAACTTGCT
TCAAAAGTTA ATGCATCTGA GACTGTTGAA ATACTAAATG TCGAATACGG CCTTAAAAAA
GACGTTCACT TCTTCAAAAA TGAGCCCCAT AAAAAAACAT ATCTTGCTCA AGTTGAGTGC
GACGAAAAAG TGTCGAGTGA AGAAGTGGCT GAATTAGTAA ATAAACTCGA AGATTTAGTA
ATTGACCAAA GGACGCCCGA TAGGGTCTCA CATCGAAGGG CTGACCTCGT GCGTGTACGT
AAGGTATATA AAGCTTGGCC GCATATGATT GATGATTATA ACTTTGAACT TAAGATATTC
TGCGATGGCG GATTATACAT CAAAGAACTC ATTAGCAGCG ATGAAGGGAG AACTACCCCT
TCCGTTTCGG AATTGCTAAA CAATAAATGC ATCTGTAAAT TTTTAGATGT TTTGGATGTT
CACGACTATG ATGATGTAGA AAATATCTAA
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| Protein sequence | MNIDYSVLKK YPLCDRCFGR LYGKLIRSSN FERGHALKLA KAIELEEDLR NALEKMNESS
ENSDNQINPE KLEEIKELMY SLYKSGISGI KLDLIEDIEK YETKFKNEAE YEKTEECEEL
CPWCKGIFEI ENIEKVAENV VDALSEYEFD SFLIGTKLPK RFKELENEIE TPFMESIRQE
FGRELGKVVV PLVKRRVDKE NPDIVVMVNP YNQKVTLQVN PVFIKGRYKK LVRGIPQSHW
HCRSCKGKGC EKCNFTGKQY MTSVEEIIAE PFMDVMKGSS EALHGAGRED IDVRMLGNGR
PFVIEIKEPK VRKVNLEELA SKVNASETVE ILNVEYGLKK DVHFFKNEPH KKTYLAQVEC
DEKVSSEEVA ELVNKLEDLV IDQRTPDRVS HRRADLVRVR KVYKAWPHMI DDYNFELKIF
CDGGLYIKEL ISSDEGRTTP SVSELLNNKC ICKFLDVLDV HDYDDVENI
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