Gene MmarC7_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1080 
Symbol 
ID5329100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1049859 
End bp1050650 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content38% 
IMG OID640793627 
Productglutamate synthase alpha subunit 
Protein accessionYP_001330297 
Protein GI150403003 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0070] Glutamate synthase domain 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTC TAGGTGAAAG AATGAAAGAA CTTAAAATTG ACGCCAATGA CATGGACTAC 
AGGGAATTAA ACGAGAAAAT CCACGAAGTT TTGGACGAAA ACAAAGACTT GGAAAAATTA
GTACTTGAAA ATGTTTTAGG ACAGAGATTT ATTGGAAACG GAATTTCAAG AAAAGATTTA
ACAATGATCG TAAATGGAGT TCCTGGCGGA GATCTCGGAA TGTTCATGAA AGGCCCTAAA
GTAGTTGTAA ACGGAAATGC TGACCATGCT CCTGGAAACA CAATGGATGA AGGATTTGTT
GTAATTCACG GAAGTAGTGG GGATGTAACT GGCCACTCAA TGAGGGGCGG AAAAGTTTAC
GTTCAAGGGA ATGTTGGATA CAGAAGTGGA ATCCACATGA AAGAATACAA ATACAAATTC
CCTGTTTTAG TTATCGGTGG GGCTGCAAAA GACTTCCTTG GGGAATACAT GGCTGGAGGA
ATTATTTTAA ACCTCAACAT GGACCAAGAA GATACCGAAA AAATCGAAGG AAGAATGATT
GCAACAGGAA TTCACGGCGG TGTAATTTAC ATCAGAGGAA TCGTTGAAAG TTCCCAACTC
GGAATTGCGG CAGACATTAA AGAATTTACC GAAGAAGACA TTGAAAAAAT TAAACCATAC
ATTGAAGAAT TCTGTGCAGA ATTTGGATAT TCTAATGAAG TTAAAGAAAA ACTTATCAAT
TCAAAATATA CAAAAATCGC TCCAATTTCA AGCAGGCCAT TCCAGAAGTT GTACACACCT
GATTTGAGAT AA
 
Protein sequence
MASLGERMKE LKIDANDMDY RELNEKIHEV LDENKDLEKL VLENVLGQRF IGNGISRKDL 
TMIVNGVPGG DLGMFMKGPK VVVNGNADHA PGNTMDEGFV VIHGSSGDVT GHSMRGGKVY
VQGNVGYRSG IHMKEYKYKF PVLVIGGAAK DFLGEYMAGG IILNLNMDQE DTEKIEGRMI
ATGIHGGVIY IRGIVESSQL GIAADIKEFT EEDIEKIKPY IEEFCAEFGY SNEVKEKLIN
SKYTKIAPIS SRPFQKLYTP DLR