Gene MmarC7_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1062 
Symbol 
ID5329000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1032876 
End bp1034102 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content43% 
IMG OID640793607 
Productammonium transporter 
Protein accessionYP_001330279 
Protein GI150402985 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.265606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAG CAGATTTATT TGCCGACCCA ACAAACATCG TAACTGGACT CAGTACCTTG 
GCAACATCTG GAGATGTAAT GTTTTTAGTA TTAATGGGAA CACTTGTGTT TGCAATGCAA
CTTGGATTTG CGCTTCTTGA AGGAGGTCAG GTCAGGAAGA AAAATGTTAA CAACGTAATG
ATGAAAAACA TGGCAGACTG GTTAATTGGG GCAGTTTCAT GGCTCTTTAT CGGATCAGTT
CTTGCAGTGT CACTTGTTCC GGGGGACTTC TTCAGCTGGT GGGGACAAAT CTTCACAACG
AACTTTGCAG ATAACGGAAT AGACTTAGCA AACTGGTTCT TTGGACTAGT GTTCGCAGCA
ACCGCAGCTA CAATCGTATC GGGTGGTGTT GCAGAAAGAA TTAAATTCAA ATCATACTTG
TTAATGTCAA TAGTAATAAC CGCAGTGCTT TATCCATTAT TCGTGTACAT CGGACCATGG
GGCTCAGGAA TGATTCCATT CAACGATTAC GCTGGAAGTT TCATCGTACA CGGTCTTGGT
GGTTTCTTAG CACTTGGAGC AATCATGGCC CTTGGACCAA GGATTGGAAA ATTCGTTAAC
AAAAAACCAA TTTCGATTCC AGGACACAAC ATTCCAATGT CAGTATTCGG GGCATTCGTT
TTAGCAATCG GATGGTACGG ATTTAACGTA GGAAGTTCAC TTGCACTTGG AGATATATCT
GGATTAGTAT GTGCAACAAC AACACTTGCA ATGGCAGGTG GAGGTATTGG GGCACTTTTA
GCTTCAAAAG ATGATGTATT ATTCACAGCA AACGGTCTTG TTGCAGGTTT AGTTGCAATC
TGTTCAGGAA CTGATGTTGT AAGCCCTGTG GGAGCATTAG TAATCGGTCT TCTTGCAGGA
ATTCAGGTAC CTATCGTCTA CAAAGTTGTT GAAAAAATGG GACTTGACGA CGTATGTGGC
GTAGTTCCAG TACACGGTAC AGCAGGTCTT TTAGGGGGTA TCTTAACGGG TATCTTTGGA
ATGGCAGCTC TCGGTGGTGC TGGTGGAGTA AGCTTGGTAA ACCAGCTTAT TGCAGCAGGA
TTAACTGTAG TATACGGTAC AGGATTAGGA TTCGGACTTG GAAAATTAGT TGGTGGATTC
ACAGGCGGAC TCAGAGTTAC TGAAGAAGAA GAAAAAATGG GACTCGACCT TGCAGAACAC
AAATTGCCAG CTTACCCTGA CGAATAA
 
Protein sequence
MATADLFADP TNIVTGLSTL ATSGDVMFLV LMGTLVFAMQ LGFALLEGGQ VRKKNVNNVM 
MKNMADWLIG AVSWLFIGSV LAVSLVPGDF FSWWGQIFTT NFADNGIDLA NWFFGLVFAA
TAATIVSGGV AERIKFKSYL LMSIVITAVL YPLFVYIGPW GSGMIPFNDY AGSFIVHGLG
GFLALGAIMA LGPRIGKFVN KKPISIPGHN IPMSVFGAFV LAIGWYGFNV GSSLALGDIS
GLVCATTTLA MAGGGIGALL ASKDDVLFTA NGLVAGLVAI CSGTDVVSPV GALVIGLLAG
IQVPIVYKVV EKMGLDDVCG VVPVHGTAGL LGGILTGIFG MAALGGAGGV SLVNQLIAAG
LTVVYGTGLG FGLGKLVGGF TGGLRVTEEE EKMGLDLAEH KLPAYPDE