| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1023 |
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| Symbol | |
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| ID | 5329159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 988860 |
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| End bp | 992255 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640793565 |
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| Product | DNA polymerase II large subunit |
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| Protein accession | YP_001330241 |
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| Protein GI | 150402947 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
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| TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.770996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCATG TTTCAGCTTC AAAAGGAATG ACTGAATATT TCAAAAATAT TTTAGACAAT
GTAACCGAAC TCTACACGCT TGCAGACGAC TGCAGAAAAA GTGGGTACGA TGTAACTGAT
CACGTTGAGA TACCCCTGGC AAAAGATATG GCAGATAGGG TAGAGGGAAT TGTCGGTCCA
AAAAATGTTG CAGAACGTAT CAGAGAACTG GTTTCTGACT TAGGAAAAGA ACCTGCAGCT
CTTGAAATTG CAAAAGAAAT AGTTGAAGGA AAATTTGGGG AGTTTGGGCG AGAAGTTGGG
GCAGAACAAG CTGTAAGAAC GGCATTAGCA GTTATCACGG AAGGAATTGT GGCGGCACCC
CTCGAGGGAA TTGCCCATGT TAAAATTAAG AAAAATAATG ATAGTGGCGA ATATCTTGCA
ATATACTTTG CAGGACCAAT TAGGAGTGCA GGGGGAACTG CTCAGGCACT CGCGGTACTT
GTTGGGGATT ACGTTAGAAA AAACATGGGA TTGGATAAAT TTAAGCCAAC AGAAGATGAA
GTTGAAAGAT ACGGGGAAGA AGTGGATTTA TACCAGTCTG AAGTTACTAC ATTTCAATAC
CAGCCAAAAG CTGAAGAAAT CCGGGCAGCA GTTAGAAACA TATCTGTAGA AATCACTGGG
GAAGCAACTG ACGATGTTGA AGTTAGTGGA CACAGGGATT TACCGAGAGT AGAAACAAAC
CAGATTAGGG GCGGTGCTCT TTTAGCACTT GTCGAGGGTG TTCTTTTAAA AGCACCCAAA
ATTCTAAGAC ACGTTGACAA ATTAGGTATA GAAGGATGGG ACTGGTTAAA AGAGTTAAAA
AGTAAAAAAG AAGAAGTAAT TGAAGAAATC GAAGAAGAAA AGGACGATTT TAACTACGAA
GAGGAAGAAG ACTTATCTCA ATATGAGGAC TATGAGGTAG AGGCTGTAAC CAAGTTTATT
GGGGAAGTTA TTGCAGGAAG ACCTGTATTT TCACACCCTT CTAAAAAAGG AGGGTTCAGA
CTCAGGTATG GAAGAAGTCG AAACACAGGG TTTGCAACAG ATGGTTTTCA CCCTGCAATA
ATGTATTTAG TTGACGACTT CATGGCCGTT GGAACTCAGT TAAAAACAGA AAGACCTGGA
AAAGCAACAT GTGTAGTTCC TGTTGACAGT ATCGAGGGCC CAATAGTCAG ATTAAAAGAT
AAAAGTGTAC TTAAAATAGA TACTGTTGAG AAAGCAAAAC AATACCGGGA TGATGTTGAA
GAAATTCTCT TTTTAGGAGA TATTTTGGTA AATTATGGGG ATTTCTTGGA AAACAACCAC
ACTATACTTC CAAGCAGCTG GTGTACTGAA TGGTATGAAA AAATCTTAAA ATCAGAAAAT
TTAGAATACA AAAAAGAATT TATAGAAAAT CCTGACCAAA AAGAAGCAGT AAACTATGCT
AAACTTACAA AAACACCATT ACATCCAAAA TATACGTATT TCTGGCACGA TATTTCTAAA
GATAATATCA ATGTCCTTAG AAATTGGATT ATTGGTGGGA AGTACAATGA AAGCAACGAT
TCCTGGGAAG TGACTTACGA TTCAGAAAAC CCCGAAATTT CAAATGCGAA GCGGTATTTG
GAACTTATCG GATGTCCACA TACAGTAACT GGTGAAAAAT TAGAAATTTT TGAGTATTAT
CCATTATTAT ATTCACTAGG TTATGATTTT GATGAAAAAA GAGATATCGT AGAAGAAATT
GAAGAAAAAC TTCAAAACAC GAAAAACAAC ATGCACTTCA TAAATACGAT AGCTCCATTT
GAAATCCGAA GAAACGCCTA CATTTACGTT GGCGCAAGGA TGGGTAGGCC AGAAAAGGCA
GCTTCCAGGA AGATGAAACC TCCTGTAAAC GGACTTTTCC CAATTGGAAA TGCTGGAGCT
CTTGTAAGGC TCATTAACAA AGCTGTTGAA GAAGGAAAAA CAGACGAAAT TGAAATTTCA
AATGTGAAAT GCAGCTGTGG AAATGTAAGT TTGTATAGGA CATGTCCATT TTGCGGAAAT
TCTGTTGAAC CAAGTGGCCC TTCTAGAATA AAACTTCCTA TAAAAGAATA CTGGTACAAA
GCGCTTGAAA ATTTGAAGAT AAATAAGGCT GGTGACGTAA AATGTATTAA AGGTATGACT
TCAAAGGATA AAATAATTGA ACCCTTAGAA AAAGCGATAT TGCGGGCAAA AAACGATATA
TATGTATTTA AAGATGGTAC TACAAGGTTT GACTGTACAG ATGTTCCAGT AACCCATTTC
AGGCCTGTGG AAATACATGT CGGTATTGAA AAATTGAAGT CATTAGGATA TTTAAAAGAT
ATTCACGGAA ATTCTCTTGA AAACGAAGAT CAGGTTCTCG AATTGAAAGT TCAGGACGTC
ATAGTTCCTG AATCATGCAT GGATTATTTC TTCAATGTTT CAAAATTCAT AGACGACCTT
TTGGAAAAAT ACTACAAAAA AGATAGATTT TACAACGTGA ATAAAAGAGA TGATCTCGTA
GGTCATTTAA TAATTGGGAT GGCACCACAC ACCTCTGCAG GAATGGTTGG AAGGATTATT
GGATATAGCA ATGCAAACGT GGGCTATGCT CATCCTTATT TCCACGCTTC AAAAAGAAGA
AACTGCGATG GGGATGAAGA TGCATTTTTC CTTCTTTTAG ATGCATTCAT GAATTTTTCA
AAGAGATTTT TACCCGACAA AAGAGGGGGC CAGATGGATG CACCACTGGT TCTTACAACA
ATTTTGGATC CTAAGGAAGT AGATGGTGAG GTTCACAACA TGGATTCGAT GTGGGAATAC
CCTATAGAAT TCTATGAAAA ATCTTTGGAA GGAATCGCTC CAAAAGAAAT CAAAAAAATA
ATGCAGACTG TTGAAGACAG GTTAGATAAA GACAGCCAGT ATGAGGGAAT TGGATATACT
CACGAAACTT TGAAAATAGA TGAAGGGCCG CTCGTCTGCG CATACAAAAC TTTAGGTTCG
ATGATGGAAA AGACTTCAGC TCAACTTGCA GTTGCAAAAA AGATTCGGGC AACTGATGAA
AGGGATGTAG CAGAAAAGGT TATTCAATCG CACTTTGTAC CTGATTTAAT TGGAAATTTA
AGGGCTTTTT CAAGACAGGG TGTAAGGTGC AAATGTGGTG CAAAATATCG AAGGATGCCT
TTAAAAGGAG TTTGTAGGAA ATGTGGAAGC AGATTGATTT TAACGGTTTC AAAAGGGGCC
GTTGAAAAGT ACATGGACGT TTCACAAACC ATGGCTGAAA AATATGAGGC AAGTGACTAC
ATAAAACAAA GACTCGAAAT TATAAGATCT GGGATTGATA GTTTATTTGT AAACGACAAG
AGAAAGCAGG TTAAAATTGA AGATTTCTTT AAATAA
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| Protein sequence | MLHVSASKGM TEYFKNILDN VTELYTLADD CRKSGYDVTD HVEIPLAKDM ADRVEGIVGP
KNVAERIREL VSDLGKEPAA LEIAKEIVEG KFGEFGREVG AEQAVRTALA VITEGIVAAP
LEGIAHVKIK KNNDSGEYLA IYFAGPIRSA GGTAQALAVL VGDYVRKNMG LDKFKPTEDE
VERYGEEVDL YQSEVTTFQY QPKAEEIRAA VRNISVEITG EATDDVEVSG HRDLPRVETN
QIRGGALLAL VEGVLLKAPK ILRHVDKLGI EGWDWLKELK SKKEEVIEEI EEEKDDFNYE
EEEDLSQYED YEVEAVTKFI GEVIAGRPVF SHPSKKGGFR LRYGRSRNTG FATDGFHPAI
MYLVDDFMAV GTQLKTERPG KATCVVPVDS IEGPIVRLKD KSVLKIDTVE KAKQYRDDVE
EILFLGDILV NYGDFLENNH TILPSSWCTE WYEKILKSEN LEYKKEFIEN PDQKEAVNYA
KLTKTPLHPK YTYFWHDISK DNINVLRNWI IGGKYNESND SWEVTYDSEN PEISNAKRYL
ELIGCPHTVT GEKLEIFEYY PLLYSLGYDF DEKRDIVEEI EEKLQNTKNN MHFINTIAPF
EIRRNAYIYV GARMGRPEKA ASRKMKPPVN GLFPIGNAGA LVRLINKAVE EGKTDEIEIS
NVKCSCGNVS LYRTCPFCGN SVEPSGPSRI KLPIKEYWYK ALENLKINKA GDVKCIKGMT
SKDKIIEPLE KAILRAKNDI YVFKDGTTRF DCTDVPVTHF RPVEIHVGIE KLKSLGYLKD
IHGNSLENED QVLELKVQDV IVPESCMDYF FNVSKFIDDL LEKYYKKDRF YNVNKRDDLV
GHLIIGMAPH TSAGMVGRII GYSNANVGYA HPYFHASKRR NCDGDEDAFF LLLDAFMNFS
KRFLPDKRGG QMDAPLVLTT ILDPKEVDGE VHNMDSMWEY PIEFYEKSLE GIAPKEIKKI
MQTVEDRLDK DSQYEGIGYT HETLKIDEGP LVCAYKTLGS MMEKTSAQLA VAKKIRATDE
RDVAEKVIQS HFVPDLIGNL RAFSRQGVRC KCGAKYRRMP LKGVCRKCGS RLILTVSKGA
VEKYMDVSQT MAEKYEASDY IKQRLEIIRS GIDSLFVNDK RKQVKIEDFF K
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