| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1021 |
|---|
| Symbol | |
|---|
| ID | 5328313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 987373 |
|---|
| End bp | 988488 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640793563 |
|---|
| Product | ATPase central domain-containing protein |
|---|
| Protein accession | YP_001330239 |
|---|
| Protein GI | 150402945 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1223] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA TCAATATCAG TAACCTGAAA CTCAAAAAAA ATCTTCAAAA GCCACCAGTA
GTTCCTGAAG AAGCATTGTG TTTAAAATAC GTGATTTTGG AACCTGTTGG CTTTCCAATA
AATGTTAATG GCGAGAATTT AAGGGTTAGT GTAGAAGACC ATGCATTATT TAACTCATAC
GCTCGAGAAC AGTGGGAAAA CGAGATTGTA AAAGAAGGCG GATACATATT TGACAGTACA
ATTATTCCAG AATACGCATT CAAGGTTATT TCTCTCTACC CAAAAGATGG AGGGATTATT
ACAAAAGATA CGCTATTTAA ATTAGAAAAC AGTACTAAAG TTGTAAATTC TCCAAAATTC
AAAGAAACTA ATTTTGAAGA AGTCATCGGA CAGCTGGATG CAAAGAAAAA ATGCAAAATA
GTAATAAAAT ATCTTGAAAA CCCAGAAATT TTTGGAGAAT GGGCACCGAA AAACATTTTA
TTTTATGGGC CGCCAGGAAC TGGAAAAACA ATGCTAGCAA GAGCTCTTGC AACCGAAACT
GAAGTACCAC TTTATTTAAT AAAAGCCACC GAACTTATTG GGGACCACGT CGGAGATGGC
TCAAAACAGA TTGAAAGCCT GTATGAAAGT GCATCAGAAA ACACCCCTTG TATAATATTT
ATCGATGAAC TTGATGCAAT TGCACTTAGC AGGCAGTTTC AGTCATTGAG AGGAGATGTA
TCAGAAGTAG TGAACGCACT CCTTACTGAA CTTGATGGAA TAAAAAATAA TTTAGGAATT
GTAACGATTG CTGCGACAAA CAATCCAGAA ATGCTAGATA ATGCTGTTAG AAGCAGGTTT
GAAGAAGAAA TAGAATTTAA AATGCCTGAT GATAATGAAA GATTAAAGAT TCTCGAGTTA
TATGTTAAAA AAATGCCTAT AACTGTAAAT GCAGATCTCA AAAAATATGT TGAAAAAACA
AAGGGCATGA ACGGAAGAAC TATTAAAGAA AAATTTCTAA AACCTGCACT CCATAAGGCA
ATTTTGGAAG ATAATGAATC GATTGAAGAA AAAGATCTCG ATGAGATAAT TAAAAAACTC
GTTAGAAATC AAGCTCCGTC AAATTTGTAC GGATAA
|
|---|
| Protein sequence | MSNINISNLK LKKNLQKPPV VPEEALCLKY VILEPVGFPI NVNGENLRVS VEDHALFNSY
AREQWENEIV KEGGYIFDST IIPEYAFKVI SLYPKDGGII TKDTLFKLEN STKVVNSPKF
KETNFEEVIG QLDAKKKCKI VIKYLENPEI FGEWAPKNIL FYGPPGTGKT MLARALATET
EVPLYLIKAT ELIGDHVGDG SKQIESLYES ASENTPCIIF IDELDAIALS RQFQSLRGDV
SEVVNALLTE LDGIKNNLGI VTIAATNNPE MLDNAVRSRF EEEIEFKMPD DNERLKILEL
YVKKMPITVN ADLKKYVEKT KGMNGRTIKE KFLKPALHKA ILEDNESIEE KDLDEIIKKL
VRNQAPSNLY G
|
|---|
| |