| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1006 |
|---|
| Symbol | |
|---|
| ID | 5328506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 975015 |
|---|
| End bp | 976124 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640793548 |
|---|
| Product | DNA primase, large subunit |
|---|
| Protein accession | YP_001330224 |
|---|
| Protein GI | 150402930 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2219] Eukaryotic-type DNA primase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTCTAG ACAACATGGA AAGTATTCGG GATTTGAATT TGATTGATGA AATAAATGAT
AGTTCAAACC TTAAATTAAT TAAATATCGG TTAAAACTTT TATTCTGGAA TAAAAACCTT
GAAATATCAG ATGAAGATAA CGAAAAAGAA TTTTTGGAGT TTTCAAGAGA ATACCAGAAT
CTGCTCAGTA TATGTAGTAC TGGAGATATT GAAATATTTT CAGAAAAAAT AGATTATTTG
ACACTCATAC TTGCAGCAAA CTCTAAAAAT CACAATATCT ACATCAAAAA GCTTGCAGAA
GAATATGCAG AAAAAATACC TCTGGAAAAC GAGGATTCGC GAGTAAATAT CTGGGATTTT
ATCGATGTTG CGGCAAATTC GAGAAATAAC GATTTACACC TTGAGAGAAT GATTCTTGAA
GGGGACATCG TTTTATTAAA TCAAAAAAGG CAGTCAATCT ATAATTTCGA AAAAATAAGG
TTAAAAATTA AGAATTACGT TGACAAGGTT CGAAATGCAC AAATGCCGAG GGAAATAAAG
GATTTACTCT TGAAAAAAGC AGAAGAGGCA TTTTCAGAAA TTAAGATAGA CTATAATATC
GAAAGCGGAA TTCGGGTAAG TACTAAAGAG TACTCTGGAG AAATCCCTGA AGACTGGCAT
CCGCCATGCA TGAGGGAAAT TTTAAACGAT ATCCTTTCAG GGGGTTCTCC TTCGCACTAC
GCAAGGCGTA GTTTTGTAGT TTATAGATTC GTGTCTCAAT TCGATCCTAA TTTAAGGCCA
ATTGAAGAAG GGACTCTTAC AAATAAAAGT GCGCAGGATA TCGCAACAGA AGATCAAATT
GAACGCTTTT TAGACGAAAT AATAAATATT TTTAAATCTG TCGGGGATTT CGATGTTGAA
AAAACTAAAT ACTATATAAG TCATAATATT GGGTACAAAG TTGCAAACCA TATTACGCAC
TGCGAGTACT GCAAGAACTG GCGTGATGAT GGTGGAAAGG GTCTTGGATA TTACTGTAGG
CCTGATTCAA CCTGTTCAAG GAAAGATATA ATACATCCTC TTGATTACTT ATGCCAAAAC
ATTAACAGAC ATGTAAAAAA ATCAGAATAA
|
|---|
| Protein sequence | MFLDNMESIR DLNLIDEIND SSNLKLIKYR LKLLFWNKNL EISDEDNEKE FLEFSREYQN
LLSICSTGDI EIFSEKIDYL TLILAANSKN HNIYIKKLAE EYAEKIPLEN EDSRVNIWDF
IDVAANSRNN DLHLERMILE GDIVLLNQKR QSIYNFEKIR LKIKNYVDKV RNAQMPREIK
DLLLKKAEEA FSEIKIDYNI ESGIRVSTKE YSGEIPEDWH PPCMREILND ILSGGSPSHY
ARRSFVVYRF VSQFDPNLRP IEEGTLTNKS AQDIATEDQI ERFLDEIINI FKSVGDFDVE
KTKYYISHNI GYKVANHITH CEYCKNWRDD GGKGLGYYCR PDSTCSRKDI IHPLDYLCQN
INRHVKKSE
|
|---|
| |