| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0939 |
|---|
| Symbol | |
|---|
| ID | 5329514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 903910 |
|---|
| End bp | 904599 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640793475 |
|---|
| Product | flagellin protein |
|---|
| Protein accession | YP_001330157 |
|---|
| Protein GI | 150402863 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1681] Archaeal flagellins |
|---|
| TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.391871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA CGGAATTTAT GAAAAGCAAA AAAGGTGCTT CTGGAATTGG TACCTTGATT
GTTTTCATTG CAATGGTATT GGTTGCTGCA GTTGCAGCAA GTGTTTTGAT TAACACAAGC
GGATTTTTAC AACAAAAAGC TGCAACAACT GGAAAAGAAA GTACAGAACA GGTTGCAAGC
GGACTTCAAG TTTTGAATGT AATGGGATAT ACAAGTGCTA CAAACGTAGA CTATGTTGCA
ATTTATGCAA CACCTAACGC AGGAAGTAGC TCAATTGATT TATCACAAGC TACATTAATG
ATTTCAGCTG GAACCAACAG GTTCATAAAA ACATATGATT CTGAAGCAGC GAATCTTGCA
TTTACAGATT ACGAAGAAAC TGCGACAACT GACAAAAATA TTTTTGCTAC AGATGATGCT
ACTGGAAACG ATTGCTGGAA ATATGTAGAT ACTGCAGATA ATGAATTCGG TATTGCTGTA
ATTCAAGATG CAGATAACAC AGTAAGTGCT GCAAACCCAG TAATCAATAA AGGGGACATT
GTTGTAATAA CAATGAAAAA AGGAACATTG TCATTAAGTA CTAGAACGCC TGTTTCAGGA
GAAATTCAGC CAGAATTTGG AGCTCCCGGA GTTATTTCAT TTACCACCCC TGCAACATAC
CTTAACGGTA AAGTTGTAGA ATTACAATAA
|
|---|
| Protein sequence | MKITEFMKSK KGASGIGTLI VFIAMVLVAA VAASVLINTS GFLQQKAATT GKESTEQVAS
GLQVLNVMGY TSATNVDYVA IYATPNAGSS SIDLSQATLM ISAGTNRFIK TYDSEAANLA
FTDYEETATT DKNIFATDDA TGNDCWKYVD TADNEFGIAV IQDADNTVSA ANPVINKGDI
VVITMKKGTL SLSTRTPVSG EIQPEFGAPG VISFTTPATY LNGKVVELQ
|
|---|
| |