| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0938 |
|---|
| Symbol | |
|---|
| ID | 5329513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 902658 |
|---|
| End bp | 903866 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640793474 |
|---|
| Product | flagellin protein |
|---|
| Protein accession | YP_001330156 |
|---|
| Protein GI | 150402862 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1681] Archaeal flagellins |
|---|
| TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA CAAAATTCAT GAAAAGCAAA AAAGGTGCTT CTGGAATAGG TACCTTGATT
GTTTTTATTG CAATGGTATT AGTTGCTGCA GTTGCAGCAA GTGTTTTGAT TAACACAAGC
GGATTTTTAC AACAAAAAGC TTCAACTACG GGAAAAGAAA GTACCGATCA GGTTGCAAGC
GGATTACAAG TCGACGGGGT TACCGGACTT GCAAGTACTA CGTTAGACAA AATGGTAGTT
TATATTACTC CAAATGCAGG TAGTGCTGCA ATTGACTTAA AAGAAACTAA AATATTTGTT
ACATATGATG ATCAAAATCA AGTATTAAGT TACGACGGAT TATTAGCAGC ATCAGCAGAT
GGTGACATAT TCTCATCAAC AGCTGCATTA AGCCTCACAA CTGCTGACGT AGTAGTTACA
AGAGGTGGAG ACAGAATTAC AATTGTAACT GCTACAGATG TATCAACATT AACTGAAGGT
ACTGCAGTTA CATTAGCTCC TGCAACAGCA CAATCCGTAG ATGACGTATG GATTACAGGT
ATTGCAGATA TCGATGGCGT TACAGGTACC GTAATATCAA GCACAGGGGC AGGACCTTAC
ACATTAGTAA TCGCACTTGA CAGCGATGAT GCTACAACAT TGGTTGCAAT TGCAGATGGA
ACTAAAGATT CTATAAAAAT AAATGGTATT GATAATATTG ACATGACTTC AGCTACATTT
ACTGAAGATG CAAATGATGG TACAGTTATT GCAATAACTG GTGCTACAGC AGAAGATATT
GACACCGATT CAGGATTATC AAATGGAGAC ACTGCTTCAA TTACCCTTGA TGACGGCTCA
ATAGTAAGTG CAGTTTCAGG TACAGTTTCC AACATAGGTG ATGACACAAT TACAATTACT
GCTGCAATAA CTGCAGTTAC AGAAGATGAA ACCTACACTG ACACAACAGG TAGTTTATCA
GGTACTACAG TTTGGGATGG AGTAGATGCT TCAAGTTTCA AAATATTAGT ATTACAAGGA
ACAGTTACTG ACGGTGTTAT CGACAAAGGT GACCTCGTTG GAGTTGCTAT TGATACAAAT
GCAATATTTG GAGGAATTCC AAATAGAGAA GCTGTTTCAG CAAAATTACA GCCAGAATTT
GGTGCTCCAG GAATTGTTTC ATTCACAACA CCTGCAACAT ACAGTACATC AATTGTAGAA
TTACAATAA
|
|---|
| Protein sequence | MKITKFMKSK KGASGIGTLI VFIAMVLVAA VAASVLINTS GFLQQKASTT GKESTDQVAS
GLQVDGVTGL ASTTLDKMVV YITPNAGSAA IDLKETKIFV TYDDQNQVLS YDGLLAASAD
GDIFSSTAAL SLTTADVVVT RGGDRITIVT ATDVSTLTEG TAVTLAPATA QSVDDVWITG
IADIDGVTGT VISSTGAGPY TLVIALDSDD ATTLVAIADG TKDSIKINGI DNIDMTSATF
TEDANDGTVI AITGATAEDI DTDSGLSNGD TASITLDDGS IVSAVSGTVS NIGDDTITIT
AAITAVTEDE TYTDTTGSLS GTTVWDGVDA SSFKILVLQG TVTDGVIDKG DLVGVAIDTN
AIFGGIPNRE AVSAKLQPEF GAPGIVSFTT PATYSTSIVE LQ
|
|---|
| |