| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0935 |
|---|
| Symbol | |
|---|
| ID | 5327809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 898498 |
|---|
| End bp | 899703 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640793471 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001330153 |
|---|
| Protein GI | 150402859 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1679] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.196972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCTGA CGAGAGAAGA GGAAAAATTA TATGCCGGAG AATACGGGGA AGCCCTAGAA
ACCTGCATGA ACTTACTTGT ATCTTTAGGG GATATTTACG GAGCAGAAAA ATTAGTAGAT
ATATCTTCTG CACAAGTTTC CGGTGTTTCG TATAAAACTA TCGGTGAAAA AGGACTGGAA
TTTTTAAAAG ATCTTGCAGA TCAGGGTTTA AAGGTATCTG TTCCAACAAC GTTAAATCCT
GCTGGAATGG ATTTGATAAG ATACGATGAA CTTAAATTTC CAAAAGATTT TGCGAAAAAG
CAACTTGAAA TAATTAATTG TTTTAAAAGA ATGGAAATTG AAATAAGCTG TACCTGTACA
CCGTATTTAA CTGGAAATGT TCCAATTTTT GGTTCACACG TTGCATGGGC AGAATCATCT
GCTGTAGCTT ACGTAAATTC TGTAATTGGT GCAAGAACAA ACAGGGAAGG CGGACCTTCT
GCGTTAGCAG CAGCAATTAT TGGAAAAACG CCATGTTATG GGTACCATTT AACTGAAAAC
AGGCTTCCAA CGCAAGTGTT TGAAGTTGAC ATGGAACTTG AGGATTCGAG TTCATTTTAC
GGAATTTTGG GAAGAATTAC CGGAAGAATT GTAAAAAACG GAATTCCATA CTTTAAATTT
AAAAATTGCG AATCAATTAA AAATGATTAT TTAAAATCAC TTGGAGCAGC ACTTGCAGCA
AGTGGCGGTG TTGCACTCTA CCACGTTGAA GGAATAACCC CAGAAGCAAA AAAGGGACTG
GAAACTGGAA ACCTTGAAAA AGTCGTTATT GGAAAAGATG ATTTTGAAAA AGAGTACGAA
AACTTCAAAA CTTCGGAAAA ACCAGATTTA ATCTGTATCG GATGCCCACA CTGCAGTCTC
GACGAAATCA AAGAAGTTGC AGAGTTTGTT AAGGCAGAAA ATGCTAAATT CAATGCAGAA
GTCTGGGTAT GCACATCAAT TCACATGAAA TCGATTGCTG ACAGGATGGG ATACACAAAA
ATTATCGAAG ACGCTGGCGG AAAAGTAGTT GTCGACACGT GCATGGTTGT AGCCCCAATT
GAAGATATGG GCTACAAAAA TGTTGCAACG AATTCTGGAA AGGCTGCAAC ATATTTACCC
GGTTTCTGTA AAAGCAACGT GATATATGGA ACAACTTATG AAATTTTGAA AAAAGCAACT
GAATAA
|
|---|
| Protein sequence | MHLTREEEKL YAGEYGEALE TCMNLLVSLG DIYGAEKLVD ISSAQVSGVS YKTIGEKGLE
FLKDLADQGL KVSVPTTLNP AGMDLIRYDE LKFPKDFAKK QLEIINCFKR MEIEISCTCT
PYLTGNVPIF GSHVAWAESS AVAYVNSVIG ARTNREGGPS ALAAAIIGKT PCYGYHLTEN
RLPTQVFEVD MELEDSSSFY GILGRITGRI VKNGIPYFKF KNCESIKNDY LKSLGAALAA
SGGVALYHVE GITPEAKKGL ETGNLEKVVI GKDDFEKEYE NFKTSEKPDL ICIGCPHCSL
DEIKEVAEFV KAENAKFNAE VWVCTSIHMK SIADRMGYTK IIEDAGGKVV VDTCMVVAPI
EDMGYKNVAT NSGKAATYLP GFCKSNVIYG TTYEILKKAT E
|
|---|
| |