| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0931 |
|---|
| Symbol | pyrB |
|---|
| ID | 5328264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 896176 |
|---|
| End bp | 897084 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640793467 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_001330149 |
|---|
| Protein GI | 150402855 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.189832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCATT TAATTTCGAT GAGAGACATC GGTCGGGAAG AAATTCTGAA TATTTTAAAC
GAATCCGAAA AAATGGAAGC TATTTTAAAT GAAAACGGTC ACTGTGATTT TTTAAATGGA
AGAATACTCG CAACTCTTTT TTATGAACCC TCAACCAGGA CAAGACTTTC GTTTGAAACT
GCAATGAAAC GACTTGGCGG AAATGTTATT GGTTTTACAG ATATTTCAAA TACTTCTGTA
ACCAAGGGCG AATCTTTAGC AGATACTATC AAAGTAATCA GTGGTTACAG CGATTTGATT
GCAATAAGGC ACCCATCAGA AGGGGCTGCA CGACTTTCGA GTGAAAATTC AAAAGTTCCG
GTTATAAACG CTGGAGATGG ATCAAACCAG CACCCGACAC AGACGCTTCT TGATTTGTAT
ACGATTAAAA GAGAAGTTGG ACACATTGAA AATTTAAAAA TCGCATTTAT CGGTGATTTA
AAGTACGGAA GAACCGTTCA CTCGTTGTGT CAGGCATTAT CACTCTTTAA AAGTGTGGAA
ATAAAATTAA TTGCTCCTGA TGAACTTAAA ATGCCAAGAG AAGTAATTGA AGATATCGAT
GGAAAACTAA AACTTTCAGA AATGACTGAC GTTGAAATTG ACGATGTTGA TGTTGTTTAC
ATGACGAGGA TTCAGAAAGA AAGGTTTGTC GATGTTAACG AATACTACAA AGTAAAAGGA
ATATATCGTC TTTCAAAAGA GCATATTGGA AACAAAAATG TGGTTATCAT GCACCCCCTT
CCAAGGGTTG ATGAAATCGA TTCTGAAGTT GATAATATTC CACAGGCAAG ATACTTTAAA
CAGTCATTTT ATGGAGTTCC TGTAAGAATG GCGATTTTAA AGCTTTTATT TGAAGATTCA
ATAAAATAA
|
|---|
| Protein sequence | MRHLISMRDI GREEILNILN ESEKMEAILN ENGHCDFLNG RILATLFYEP STRTRLSFET
AMKRLGGNVI GFTDISNTSV TKGESLADTI KVISGYSDLI AIRHPSEGAA RLSSENSKVP
VINAGDGSNQ HPTQTLLDLY TIKREVGHIE NLKIAFIGDL KYGRTVHSLC QALSLFKSVE
IKLIAPDELK MPREVIEDID GKLKLSEMTD VEIDDVDVVY MTRIQKERFV DVNEYYKVKG
IYRLSKEHIG NKNVVIMHPL PRVDEIDSEV DNIPQARYFK QSFYGVPVRM AILKLLFEDS
IK
|
|---|
| |