| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0904 |
|---|
| Symbol | |
|---|
| ID | 5328295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 864994 |
|---|
| End bp | 866961 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640793434 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001330122 |
|---|
| Protein GI | 150402828 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0628818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.273886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAA ATAAATTTGC CCCTTTTTTA ATCCTTTTAC TTCTCTGCGT AAGTCCTTCT
CATGCTGCGT GGACCGATTA TATTCCGTTA TATGGTACAT TTACAAGTGT AGTTGATACC
GCTACTGGGT TATTAGATTC ATTTTCTGGA ATGATGGATT CTATAACTGG TGCAATGGAT
TCTCTTAGTT CATTTCTGGA TCCTGATGAT GCAGCAATAA TTGAAACTGA TGATATAGAA
AATCAGACCG CAATAGGTAT TGGAGATAAA GAGTATTTTT CAGCAGAGGA GTTAAATGAA
GCGGGTCAGG AGTCCTTAAA CAATGTTTCT AATACGGTAA ATTCTGCTTA TTCAGTACTT
TTGAACTATT CTGTTGAAGG TACTGGCCTT GGAAAAATAG ATATTGGACT TATAAGTAGG
GATAAAATAT ATGGATATTC CGCTTTTCCG ATTCAAATGA GTATTTATAA GCCTTCAACA
ACTGCTTATC ATGATTACTT TCATTTAGAA AGTTATTCTT TATGGGTTGA AGATATTGAT
GATCCAGGAA TAAAACTTTG GACTTATACC GAATCAGGAT TAAATACAAT TGCTTATCCT
GGTGATTCTG CAATATGTGA AGCTACGATT CTTAAAGCTC CAGATGATAA GTATGCAACT
GTAAAATCCT GTTTAACTTC CAATTCTAAT TTATTGGAGT TGGATGGTAT AGTAACATCC
CAAAATAAAC AGTTTGAGAT TTGTGGAAAT GTTGTTGGAT ATATTGAAAA CTGGTATGAG
GTTGCTGTAA GTAATCCTGA TGGTTCGGTA TCTTATGTAT GGAGAAGGGG CCCCGATATT
CCGGTTGATT TGGATATTGA AACTACATCT ATGTGGAAAC ATGAAAAGAA TGGGGTATTT
TCATTGAGTG GTGCTAAAAG TACCCTTCCA GTAAATGATT GGGAAGAATA TGGATATTTA
TGGGTTCCAT ATGCTTCGTT AAATCAAGGT TCAACATCAA ATATTCTTGC TCAGTTATGG
GCTAGTCCAG TACATATTGA AGATTCAAGT AGCTCTTACA GTTTTTTTGC AATGTATAAT
GCAGAGTATA ATTGTATAGA AGAGTTAGAT ATGGATCTAT CTAATGTGGA TACAAGAATT
GTTACTTTGG CTGTATCAAA TGATTCAAAC TTTGAGGTTG CAGGATCTTC TAGTTATGAT
AATTTGAATA TAGGTTCAAC TTATAAAATT TCAGGAAACT TGCCATTTAT ATCAAATTCA
GATAATGTAG CTTCTTGGAA GGTTTACGCT ATCACCTATG GGGAAATTGT AAGAGATGAC
GGTCAAAAAT TACCTGTTTG GACTGTTGTT AGACCTTGGA TCGCTGTAAA CGATAATGTT
CAAATATTAG GTCTTGATAC TGCAACTGAA CTCGAAGACC TTTATTTGGA TGGAAATGTA
AATGAGTCTG AACTTGAAGA AGTGAAAAAT ACTGCAATTT CGGAAATAGA ATCTGCACTT
GATGGAATAG ATCAAGATAT GGGTTATGCA GAGGGAAATG ATAATACAGA TATGATTAGA
GTATTAAATA AAGCAAAATC ATGTCTTAAT AATGCTGAAA GTGTAATTAA ATCAATATCT
TCAACAGATA CCGAAGATGA AAAGACTGCG AAAATCAATA AATACAAGCT TTATCTTGAA
GCGTCTGAAA TGTACTTAAA AGCATCTGTT TGTTACAAAG CAAGTCTTGA TACTGATGGA
GAGTACTATG AAGACATGGC AGATGAGTTA GTATCAAAAG AATCAATAGT AATTACTTCT
GATTCAATAT TTGATACATT AAATGATATT CCAGTAATTG GAACACTTGT TTCATATATT
CCGGGTGGAT GGTGGACTGT CATAATTTGT TTATGTTTAA TTGGCGGTTA CTACTACCTT
GAAAATGATA AGAAAAAAGG TTCTAAGGGA TGGAGTAAAA AATACTAA
|
|---|
| Protein sequence | MVKNKFAPFL ILLLLCVSPS HAAWTDYIPL YGTFTSVVDT ATGLLDSFSG MMDSITGAMD
SLSSFLDPDD AAIIETDDIE NQTAIGIGDK EYFSAEELNE AGQESLNNVS NTVNSAYSVL
LNYSVEGTGL GKIDIGLISR DKIYGYSAFP IQMSIYKPST TAYHDYFHLE SYSLWVEDID
DPGIKLWTYT ESGLNTIAYP GDSAICEATI LKAPDDKYAT VKSCLTSNSN LLELDGIVTS
QNKQFEICGN VVGYIENWYE VAVSNPDGSV SYVWRRGPDI PVDLDIETTS MWKHEKNGVF
SLSGAKSTLP VNDWEEYGYL WVPYASLNQG STSNILAQLW ASPVHIEDSS SSYSFFAMYN
AEYNCIEELD MDLSNVDTRI VTLAVSNDSN FEVAGSSSYD NLNIGSTYKI SGNLPFISNS
DNVASWKVYA ITYGEIVRDD GQKLPVWTVV RPWIAVNDNV QILGLDTATE LEDLYLDGNV
NESELEEVKN TAISEIESAL DGIDQDMGYA EGNDNTDMIR VLNKAKSCLN NAESVIKSIS
STDTEDEKTA KINKYKLYLE ASEMYLKASV CYKASLDTDG EYYEDMADEL VSKESIVITS
DSIFDTLNDI PVIGTLVSYI PGGWWTVIIC LCLIGGYYYL ENDKKKGSKG WSKKY
|
|---|
| |