Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0862 |
Symbol | hisS |
ID | 5329373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 831179 |
End bp | 832435 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640793392 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001330080 |
Protein GI | 150402786 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.393397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0052458 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCATGT TTCAAAAACC TAAAGGTACA CGGGATTTTT TACCTGAAGA AATGAAAAAA AGGAAAGTAA TCGAAAAAAA ACTTAGAAAA GTTTTTGACA GTTATAATTT TTCTGAAATA AACACGCCTA CATTCGAAAG CTTTGAATTA CTCTCTAAAA AAACAGGAGA CGAAATCAGA ACACAGCTTT TTGTTTTTAA AGACCATGGA GACAGAGAAA TGGGTTTAAG ACCTGAATTG ACGTCTTCAG TTGCAAGGTT CTACATAAAC GAGTTTAAAA ATACTCCAAA ACCAGTTAAA CTCTACTACT TTACAAACTG TTTCAGGTAT GAAAACCCGC AGGCTGGAAG GTACAGGGAA TTCTGGCAGA TGGGCTCTGA ACTTATTGGA AGTAATAAAC CTATTGCAGA TGCAGAAGTT ATAAACATGG CAATAGAAGG TTTAAAAGAA ATTAACATGG ATTTTGAAAT AAACATTGGA CACCTCGGTG TTTTAAAAGG TGTTTTTGAA AAATACGATC TTTCAGACGA TGAAGGAAAT GAAATAAGAC GTCTTATCGA TAAAGAAGAT ATGGATGGAT TAAAATCAGC TTTAAACAGA ATAGAATCCG AAAAAAATAT TGAAATTTCA GAAAAAGTAT TTGAAGTTCT CGATTTAAAA GGCGGAAGAG AAGTAATTTC CAAATTAAAA GAAAAATTAG CTGAATTTGA AAGTTCAATA GCTGCTTTAG AAAATCTTGA CAGCATTCTT GAATTTGTGC CTCACGAATA CATTATAAAC TTCGGAATTG CAAGGGGACT TGACTACTAT ACCGGAATGG TCTTTGAAAT TTACGGAAAA AGAGAAGGTG CAAGACAGGT ATGCGGTGGT GGAAGGTACG ATAATTTAAT CGAGCTCTTC GAGGGTGAAC CAAGCCCTGC TGTTGGTTTT GCTTACGGTT TTGACAGAAT AATGTTAAAT ATCGATGATT TTGAAGTTGA AGAAGAATCA ATATTTGTAG TTCCGGTTAA AAGTAGCGAT ATGCTTCTTA ATGAGTGTTT GAAAATTGCA AAAACATTAA GGGAAGCTGG AAAAGCAGTA GAATTAGATT TAATGGGCAG AAAATTAAAT AAAGCATTAA ATTATGCGAA TACAAAGGGC ATTAAAAAAG TAATAATTGT TGGCGAAAAT GATATTTTGG AAGGAAAAGT CGCTTTGAAA AATATGGAAA CTGGAGAACA GTCTTTAATT GAATTAAAAG ATATTTTAAC TATCTAA
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Protein sequence | MIMFQKPKGT RDFLPEEMKK RKVIEKKLRK VFDSYNFSEI NTPTFESFEL LSKKTGDEIR TQLFVFKDHG DREMGLRPEL TSSVARFYIN EFKNTPKPVK LYYFTNCFRY ENPQAGRYRE FWQMGSELIG SNKPIADAEV INMAIEGLKE INMDFEINIG HLGVLKGVFE KYDLSDDEGN EIRRLIDKED MDGLKSALNR IESEKNIEIS EKVFEVLDLK GGREVISKLK EKLAEFESSI AALENLDSIL EFVPHEYIIN FGIARGLDYY TGMVFEIYGK REGARQVCGG GRYDNLIELF EGEPSPAVGF AYGFDRIMLN IDDFEVEEES IFVVPVKSSD MLLNECLKIA KTLREAGKAV ELDLMGRKLN KALNYANTKG IKKVIIVGEN DILEGKVALK NMETGEQSLI ELKDILTI
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