Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0848 |
Symbol | |
ID | 5327920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 819118 |
End bp | 819900 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640793378 |
Product | putative RNA methylase |
Protein accession | YP_001330066 |
Protein GI | 150402772 |
COG category | [R] General function prediction only |
COG ID | [COG4076] Predicted RNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.231779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0319952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAATTAA AATTGTCTGT ACCTCAGTGG CACTACAGTA TGCTTTTAGA TGATGAAAGA GTTTCAGTAT TTAAGGAAGC AGTTGAAGAA TCCGTAAAAT CTGGTAATAT CGTATTTGAT CTTGGAACTG GAAGTGGAAT TCTTGCAATG ATTGCAGCAA AAAATGCAAA ACACGTTTAT GCAGTTGAAT TAGATCCTAT AACAACTGAC TATACTAAAG AAAATATAAA AGAAAACGAT TTTAAAAATA TTACTGTTAT CGAAGATGAC GCGGCTTATT ATCCCTTTTC AGAAAAAGCA GACATCGTAA TTGCAGAACT TCTCGATACT GGATTGATTA CCGAACCACA GGTTCCGGTT TTAAATTCAA TAATCAAAAA AGGGCTTTTA AAAGAAGGGG GAATAATAAT CCCAGAAGAA GTTTATAACT CTGCACAGAT TGTTAAATCA AAAATGGACC ACATTTATTA CGATGAAGAA GTAACGTCAG AAGAGGTTTC AAACGAAATT ATTTATGATA CTATTAATTT TTACAAGGTA AATGATGAAG ATGTCGAATA TTTACTTAAC TTTGATTTAA AAGAAGACGT AAAAAATCCG GCAGTAAGGT TGAACACTTA TACAAAATTA AAAGAGGATC TTATTTCTGG TTCAAGCCCC ATGTTAAATC CACCGCTTGT GATTCCAATA ACTGGAGAAT TAAAGGCAGG AACTGTTAAA ATAAAATTAT CCTATGTAAT GGGCGGAGAT TTGGAGTCTA TAAACGTTCA AATTATAAAA TAG
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Protein sequence | MELKLSVPQW HYSMLLDDER VSVFKEAVEE SVKSGNIVFD LGTGSGILAM IAAKNAKHVY AVELDPITTD YTKENIKEND FKNITVIEDD AAYYPFSEKA DIVIAELLDT GLITEPQVPV LNSIIKKGLL KEGGIIIPEE VYNSAQIVKS KMDHIYYDEE VTSEEVSNEI IYDTINFYKV NDEDVEYLLN FDLKEDVKNP AVRLNTYTKL KEDLISGSSP MLNPPLVIPI TGELKAGTVK IKLSYVMGGD LESINVQIIK
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