| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0846 |
|---|
| Symbol | |
|---|
| ID | 5328229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 817604 |
|---|
| End bp | 818269 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640793376 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_001330064 |
|---|
| Protein GI | 150402770 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.391871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.188053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATATTA TCATTGCAGG AATGGGTAGA GTTGGAATTT CACTTGCAAA ATCGCTTTCA
GGTAAGGGAC ACGATTTGGT GTTGCTCGAT CAGAACAAAA AAACATGTGA AGAAGTTGCA
GGCGAAATCG ATGCCCTCGT AATTAATGGG GACTGTACAA AAACAAAATC GCTTGAAAAT
GCAGGCATTG AAGATGCAGA AATATTTATT GCAGTTACTG GAAATCAAGA AATAAACCTG
ATCAGTGGAT TGATTGCAAA AAAATTCAAT GTTCCAAAAA CTATCGCAAG AGTTAGTGAA
CCGGATTACA AAAGCGTGTT CGAAAGTCTT GGAATTGGTG TTGTAATAAG CCCCGAGCTT
GTTGCAGCAA ACTACATAGA AAAATTAATC GATAGACCTG GTGTTGTAGA CCTTGCAATC
GTTGGAAGGG GGGATGCAGA AATATTAGAA CTCATAATTC CTCCAACATC AAAAGTTGCA
GATAAAAAAA TCAGGGAACT TGGTGGGGCA AAGGACTACG TCATAATTGC GATCTACGAA
GGAAACGAGC TAAAAATTCC GGATGGAAGT ACTGAATTAA AAGCATACGA TAGAATCTTA
ATTTTGGTTA AAACAGATTC ATTGGAAGAA GTTAGAAAAG TCTTTTCAAG TGAAAACAAG
GAATGA
|
|---|
| Protein sequence | MYIIIAGMGR VGISLAKSLS GKGHDLVLLD QNKKTCEEVA GEIDALVING DCTKTKSLEN
AGIEDAEIFI AVTGNQEINL ISGLIAKKFN VPKTIARVSE PDYKSVFESL GIGVVISPEL
VAANYIEKLI DRPGVVDLAI VGRGDAEILE LIIPPTSKVA DKKIRELGGA KDYVIIAIYE
GNELKIPDGS TELKAYDRIL ILVKTDSLEE VRKVFSSENK E
|
|---|
| |