Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0817 |
Symbol | |
ID | 5328252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 791651 |
End bp | 792406 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640793347 |
Product | TatD family hydrolase |
Protein accession | YP_001330035 |
Protein GI | 150402741 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.240566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTAG ATGATTTTAA GTATATAGAT TCCCACTGTC ACGTTGAAGA TAAGTCACTC AACAAATGCC GTGAAGAGGT CATAAAAAGG GCATTTGATG AAAAAGTGCA GATGGTAACA AGTGGTACGA ATTTGGGCAG TTGCAGGAGG GCTGTTGAAT TAAAAGATAA ATATGGAATG TACATAACTC TTGGATACCA CCCTGGAAGG GTTAATGCAG AGGATAATGC AATTGACAAA GTTTATAGAT TTATTCAATC AAAAGAAAAG GATATTTTAG CAGTTGGTGA AATAGGGCTT GATTTTGATA CCAAAAATAT CGAAAGACAG GAAATTATAT TTAAAAAATT TATAAAACTC GCTGAAGAAT TAAATAAGCC CGTAGTAATT CATGCAAGGG GTATGGAAGA GCGTTCTTAT GAAATTTTAA AGAATGATTC AGTTTCAATG TATCATTGTT ACAGCGGTTC GCTAGAACTT GCGAGAGAAT TGGTCGAAAA CGGCAATTTT ATTTCATACT CTACGTTGGT ATGTTTTTCA GATCATCATA AAAATCTTGT TAAAAATCTT AATCTTGAAA ATATAGTCGT AGAAACAGAT AGTCCTTATC TTTCACCGAT AAAAGGTGAA AAAAATGAAC CAAAAAATGT AATAAAGGTT ATTGAATCGA TATGGGAATT AAAAAAGGAT GAATATTCCT TAGACGAAAT CACTAAAATT ATATACAATA ACACAAAGAG GTTATACCAT ATTTGA
|
Protein sequence | MNLDDFKYID SHCHVEDKSL NKCREEVIKR AFDEKVQMVT SGTNLGSCRR AVELKDKYGM YITLGYHPGR VNAEDNAIDK VYRFIQSKEK DILAVGEIGL DFDTKNIERQ EIIFKKFIKL AEELNKPVVI HARGMEERSY EILKNDSVSM YHCYSGSLEL ARELVENGNF ISYSTLVCFS DHHKNLVKNL NLENIVVETD SPYLSPIKGE KNEPKNVIKV IESIWELKKD EYSLDEITKI IYNNTKRLYH I
|
| |