| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0808 |
|---|
| Symbol | |
|---|
| ID | 5328077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 786134 |
|---|
| End bp | 786841 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640793338 |
|---|
| Product | tetrahydromethanopterin S-methyltransferase subunit D |
|---|
| Protein accession | YP_001330026 |
|---|
| Protein GI | 150402732 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4060] Tetrahydromethanopterin S-methyltransferase, subunit D |
|---|
| TIGRFAM ID | [TIGR01112] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCTA CAAGCTTTAT ATTACCTCTT GCGGAAATAA CCATTGCAGG AGCGATTATC
AACGCAAGCG TTCACTTCGT TCCAGTAGGT GGTGCTCCAG CAGCGATGGC TACTTCAACA
GGGGTAGGTA CAGGTACAAC ACAGTTAGCA GCAGGTGCAG GTTTTACCGG TCTCTTGGCT
GCAGCTACAA TGGCTTCACA AGCGGGAGTT TCATTGGCTA ACCCAGTTCA CATGTTATTA
ATCATGTTAT CTGGTGCTGT CGGTGCAATG ATCATGTTAG GCCTTACAAT GTTAATCGGT
CAAATTATCT ATGTATACGG TATTGGTATC GTCCCTGCAG CAGATAAGTG TGAAAAAGAC
CCTATTACGG GAGATATTCA AAAACCATAC ATCACACCAG GTACAACAGG ACACGGTATT
CCAACCGTTT GTTTTGTAAG TGGTTCAATT GGTGCAGCGC TCGGTGGTCT CGGTGGTGCT
CTTGCATACA TCGCACTCCA ACAGTTAGGA TTTGCTGCAG CTATTGCCGG TGTTTTGGCA
GTTGGTTTCT TCTTCATGAA CGCGGTTTTA GCTTCATACA ACATTGGTGG TACAATCGAA
GGATTCCACG ACCCTAAATT TAAGAAAATG CCAAACGGAG TTATTGCTTC ATTTGTTTCT
TCATTAATCG CAGGTGCAGT ATTAATTGGA ATGGCTATGG GACTTTAA
|
|---|
| Protein sequence | MDATSFILPL AEITIAGAII NASVHFVPVG GAPAAMATST GVGTGTTQLA AGAGFTGLLA
AATMASQAGV SLANPVHMLL IMLSGAVGAM IMLGLTMLIG QIIYVYGIGI VPAADKCEKD
PITGDIQKPY ITPGTTGHGI PTVCFVSGSI GAALGGLGGA LAYIALQQLG FAAAIAGVLA
VGFFFMNAVL ASYNIGGTIE GFHDPKFKKM PNGVIASFVS SLIAGAVLIG MAMGL
|
|---|
| |