| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0774 |
|---|
| Symbol | |
|---|
| ID | 5328323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 756746 |
|---|
| End bp | 757435 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640793301 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_001329992 |
|---|
| Protein GI | 150402698 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.811993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT TTGAAAAGCT GCTTTCGAAA CTTGATATAA AATTTAATGA TTTAGATATA
TTTAAACGAG CATTCATGCA TTCTTCGTAC GTAAATGAAC AGAAAAATAC CAATTTAGAA
GATAATGAAC GATTGGAATA TTTAGGGGAT GCTGTTTTAG AGTTAATAAT TAGTGAATAC
CTGTTTAAAA AAGAAAGTTT ATCTGAAGGA GAAATGTCTA AATTGAGGGC AAAATACGTC
TGTGAAAGTG CACTTTTTAC ATATGCTAAA AAGTTAAAAT TTAACGATTA TGTGCTTTTG
GGAAAGGGCG AATTAAATTC TAAAGGATAC AATAAACCCG CAATAATTTC GGACGTTTTT
GAAGCATTTA TCGCAGCAAT ATATCTAGAT CAAGGGCTAG ATTCAGCTAA AAAGTTTGTA
AATAATCATA TAATTCCAAT TATTGAAGAA AACTCAAAAG AATTGTTTAT AGATTATAAA
ACCAGATTGC AAGAATTTCC TGAATTAAAC AATAAAACTA TCGAATACAT AAATTTAGAA
GAAGTTGGTG AACCCCACGA TAAAAAATTT ATTGTGGCTG TAAAATCTGG GCGAAAGATG
CTTGGAAAGG GGACCGGAAA AAGTAAAAAA GAAGCTGAAA TGAAAGCTGC TAAGAATGCA
CTTTTAAAAC TTGAAAAAAA TAAAAATTAA
|
|---|
| Protein sequence | MKNFEKLLSK LDIKFNDLDI FKRAFMHSSY VNEQKNTNLE DNERLEYLGD AVLELIISEY
LFKKESLSEG EMSKLRAKYV CESALFTYAK KLKFNDYVLL GKGELNSKGY NKPAIISDVF
EAFIAAIYLD QGLDSAKKFV NNHIIPIIEE NSKELFIDYK TRLQEFPELN NKTIEYINLE
EVGEPHDKKF IVAVKSGRKM LGKGTGKSKK EAEMKAAKNA LLKLEKNKN
|
|---|
| |