| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0707 |
|---|
| Symbol | |
|---|
| ID | 5329558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 692681 |
|---|
| End bp | 693808 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640793232 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001329925 |
|---|
| Protein GI | 150402631 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAG TACCGATTGG ACCCATTCAC CCGATATTGA AAGAACCTTT GCGAATAAAA
CTCCTCGTTG AAGGAGAAAA CGTAAAAGGT GCTGAAATAG ACATGGGTTA CGTTCACAGG
GGTATTGAAC GGATTATGGA AGGAAAACAT TATTTAAAAT GCATACACCT TTCAGAAAGA
GTTTGTGGAA TTTGTTCGTA CATTCACACC CAATCCTTTG CGGAATGTAT CGAAAATATG
TGTAAAATTG AAGTTCCAGA TAAAGCAAAA TATTTAAGAG TAATTACCTG TGAACTTGAG
AGAATTCACA GCCACTTAAT TGCAGCAGCA GTTTACAACC TTACAATCGA GCATGAAACT
ATGGGAATAT GGCTGTTAAA TGTAAGGGAA ACTGCCATGG ATTTACTCGA ATTAATTACT
GGAAACAGAG TAAACATGGG TTTTAACGTT GTTGGTGGAG TGAGACTCGA TTTAAACAAA
GAAATTTTAG ATACAATTCA CAAAAAAATT GATGAATTTG AAGAAGATGT GAAAAACATT
ATTGAAGCAT TCGAAACTGG GCCTTTGATT GCAATGAGAA GTAAACATAT TGGAAAAATC
GGGTACAAGG AAATCATGAA AACACGTGCA GCAGGGCCTG TTGCAAGAGC TTCAGGAATT
CCCGAAAGTG ACTGGAGAAT AAGACATGAA ACTTACCAAG CATTGAATTT CAAGCCAGAT
TGGAGAGATG AAGGCGACAA CTACGCAAGA ATGATGGTAA GGCATGACGA AGTGCTAACG
AGTGTTGAAC TTATAAGGCG GGCCCTTGAA CAGTATACAG AATGTTCGGG AATCGTCAGA
AATAAAGCTG AAATTAGGGC AACTGAAGGA GAATGGTATA ATGAAGCCCA TAGAGGCGAA
GTTTACTATA AAATTGCAAT TACTGATGGC GGACTCATAA AAAGAATTAT TATTCGAACT
CCAACAGTAA TGAACCTTGA AGCCTATAAA TACATGATAA AAGACTGTCC AACAATTGCA
GATGCAGTTG CCACATACAC CTCAATAGAC CCTTGTGTGT CATGCACAGA ACGAACTATC
CAATTAAAAG ACTTAAATAA CGGAAAATTG AGCGACTACA AATTCTAA
|
|---|
| Protein sequence | MNVVPIGPIH PILKEPLRIK LLVEGENVKG AEIDMGYVHR GIERIMEGKH YLKCIHLSER
VCGICSYIHT QSFAECIENM CKIEVPDKAK YLRVITCELE RIHSHLIAAA VYNLTIEHET
MGIWLLNVRE TAMDLLELIT GNRVNMGFNV VGGVRLDLNK EILDTIHKKI DEFEEDVKNI
IEAFETGPLI AMRSKHIGKI GYKEIMKTRA AGPVARASGI PESDWRIRHE TYQALNFKPD
WRDEGDNYAR MMVRHDEVLT SVELIRRALE QYTECSGIVR NKAEIRATEG EWYNEAHRGE
VYYKIAITDG GLIKRIIIRT PTVMNLEAYK YMIKDCPTIA DAVATYTSID PCVSCTERTI
QLKDLNNGKL SDYKF
|
|---|
| |