Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0643 |
Symbol | |
ID | 5328446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 649695 |
End bp | 650942 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640793168 |
Product | diaminopimelate aminotransferase |
Protein accession | YP_001329861 |
Protein GI | 150402567 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.166626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00154424 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGTA TTTTGGATGA AACTATCAAA CTTTCTTCTG AATTAATATC AATAAATTCA GTAAATCCAA CTTTTGGTGG AGTTGGAGAA AAAGAAAAGT CGATTTACAT AAAAAACAAG CTAATGGAAT ACAGTGAAAA GTATTCTGTA AAAAACTGCG AAATATTAGA GTTCAACACT GTTGATTCAA ACGGAATTGA AAGACCAAAT ATTGTTTCAA AATACAATTT TGGAAAAACT AATACTTTAA CGATAATTTC ACACATGGAC ATCGTTCCAG AAGGTGACCT TGGTCTTTGG AATTCCAATC CGTTTAAAGC AGAAATAAAA GACGGAGTAA TTTACGGAAG GGGTAGTGAA GACAATCATA AAGGAATAGT TTCATCGTTT TTACTTTTAA AAATGATTTT TGAAGAAAAA ATCGATCCAA AATACAATTT AAATTTGATT TTTGTGTCAG ATGAGGAAGA TGGAAGTAAA TATGGTCTAT CTTACATTGT AAATAACTTC GAAAATGAAC TTTTCGATTC AAAAGATTTG ATACTCGTTC CTGATTTTGG AATGCCTGAA GGCGAATTTA TAGAAATTGC TGAAAAAAAT ATACTTTGGC TAAAGTTTAA AATTAAAGGA AAACAGTGCC ACGGAAGTAC GCCTGAAAAC GGATTTAATG CAGATATTAT GGCATTTGCC TTTGGAAAGG GGCTCTATGA TACATTATAT AATAAATACA GTAATCTTGA TTTGATATTC AATCCGCCAT TTTCAACATT TGAACCTACA ATTTTAAGAA ATAACGTTGA AAACACAAAT ACAATTCCAG GATATGTTGA ATTAAACTTT GATTGCAGAA TTATCCCAGA ATATGATCCA AAAGAAGTAT TAAACGATAT TGAAATGTAT ATTGAAATTT TTAAAAATGA AATTGAAAAA CATATCGTCC ATTATGATAT TTCTGAAAAA GAGAATATTT CAATAGAGTA TGAAATTTTA AAACTTGAAA AAACCGAAAA AACTAAAGAA GATTCAGAAG TAGTAAAAAA ATTGGGCTCT GCAATTAAAA ATGTGCTGAA TAAAGAACCA GTTTTATGCG GAATGGGTGG AGGAACTGTT GCTGCATTTT TAAGAGAAAA AGAATACAAT GTAGCTGTTT GGGGGCTTGG AGATGAGACT GCCCACCAAC CAAACGAACA TATTAAAATA GAACATTTAA TAAAAATGGC TGAAATTTAT CTCGATATAT TAAAATAA
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Protein sequence | MKSILDETIK LSSELISINS VNPTFGGVGE KEKSIYIKNK LMEYSEKYSV KNCEILEFNT VDSNGIERPN IVSKYNFGKT NTLTIISHMD IVPEGDLGLW NSNPFKAEIK DGVIYGRGSE DNHKGIVSSF LLLKMIFEEK IDPKYNLNLI FVSDEEDGSK YGLSYIVNNF ENELFDSKDL ILVPDFGMPE GEFIEIAEKN ILWLKFKIKG KQCHGSTPEN GFNADIMAFA FGKGLYDTLY NKYSNLDLIF NPPFSTFEPT ILRNNVENTN TIPGYVELNF DCRIIPEYDP KEVLNDIEMY IEIFKNEIEK HIVHYDISEK ENISIEYEIL KLEKTEKTKE DSEVVKKLGS AIKNVLNKEP VLCGMGGGTV AAFLREKEYN VAVWGLGDET AHQPNEHIKI EHLIKMAEIY LDILK
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