Gene MmarC7_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0642 
Symbol 
ID5328460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp646092 
End bp649661 
Gene Length3570 bp 
Protein Length1189 aa 
Translation table11 
GC content33% 
IMG OID640793167 
Productchromosome segregation protein SMC 
Protein accessionYP_001329860 
Protein GI150402566 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00029691 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTCAT TATCAGAAAT CCACATGAAA AACTTCAAAT CATTTAAAAA TTCAAAACTA 
AAAATTCCCG ATGGCTTCAC TGCGATACTG GGGCCGAATG GATCAGGAAA ATCGAACACT
ATTGATGGCA TCTGTTTTGT TCTTGGGAAA ACTTCAGCAA AATCGCTCCG TGCAGGTAAA
TTCAACCAGC TTATTACTTA CCATAATGGA AAAAGGGAAA GTTTCGCAGA AGTTACACTT
TTTTTTGATA ATAAAGATAG GAAAATGCCC CTGGATTCGG ATAAAGTAGG AATATCGAGG
AAAGTTAAAA TAAACGGAGA TAACAACTAT TACCTTATAT GGGACGAAGA AAAAGAAGTT
AAAGAAAATG GGGAAGTAAA AAAGGTAATG GAAGAAAAAC GGAAAAAAGT AAAAAAATCT
GAAATTTTAG ACGTTATTGG AAAAATATCG CTTAGTGCGG ATGGATTTAA TATTATTCTT
CAAGGCGACC TCATAAAAAT TATAGATACT ACCCCAAATG AAAGGAGAAA GATTATCGAT
GAAATAAGCG GTGTTGCAGA ATTCGATGAA AAAGGGGAAA AAGCGGAAAA GGAACTTGAT
AAAGCAAGGG AATTTATTGA AAAAATAGAT ATCAGGATAA ATGAAGTGAA AAACAACCTT
GAAAAACTTA GAAAAGAAAA AGAAGATGCA GAAATATACG TTAAATTAAT GGAAGAATTG
AAAGCTACAA AGTATATTTT AACTGCTAAA AAAATTGAGT TTTTAAACGG AGTTTTGGAA
AAAACCAAAG AAGAAATTGA AGCACTTAAG GAAATGAAAG TTTGTTTTTT GAAAGAAATT
TCTGAATACG ATGCAAAATC AAATGATATT AGAAACAGAC TTCAAAATTT GATAAATGAA
CTGAATGAAA AGGGAAACGA AGAGATAATG GAACTTCACA AGTCCATTAA AGAAATGGAA
GTTACCGTTG ATAATGACAA AAAATCCCTA AACGGGGCCC TTGACGACCT GAAAAATGTA
AATTCGCAGT CCGAAAAAAA AGGACAGGAT TTAGTGGAAA CCAGGCAAAA AATAGAAACA
ATACGGACTG AAACACTTCA AAAAGAAGCA GAAATTAACG CATTGAAGAC CGAAATGGAA
AATCTTGAAA CTGAAAAGAA GAAATTGAAA TCAAAAGTCG AAGAAAGTGA AACTCAAACT
GAAATTTTAA AACAGCAAGA GCGAAAACTA TCTGAAAGAA TAAATGAAAG TCAGAATGAA
CTCTACAATT TAAAAAATGA ATTTAATGCT CTTGAAAATG AAATCAATAA AAAATCATTT
AATTTAACAA AAAATCAAGA AATCATTGAA ACCCTTCAAA AAGAACTCGA TGACATAAAG
TCAGAAAGCG AAGATACAAA GGTACTATAT AAAGAACTTG AAGACGTTGC TGTTGAACTC
GAATACTCTA AAAAGAAAGT TATCACACTT TTGGAAAATA AAAAAGAGTA TCAAGAAAAA
TTGGATAAAG GCCATGCTGA ATACATCAAA GAAAATGCTA AAATCAAGGC AATGAAAGAT
ATGGAAGATT TTAGTCTGGA TAGGGCCGTA AAAAGTGTTC TTGAAGCAAA ATTGCCTGGC
GTAGTAGATA TTGCGGGAAA CCTTGGAAAG ACAGATGCTG AATACAAAAC TGCAATTGAA
AATGCAGGTG GAAACAGGCT AAATTACATC GTTGTAAAAA GAATGGATGA CGGTGCAAGA
GCTATTCAGT ATTTGAAAAA GAATAATCTT GGTAGAACCA CATTCTTACC ACTCGATAGA
ATCAATGGGC CAGAAGCACT TTATCTTGAT GATGAAGGAG TAGTTGGAAG AGCGATTGAT
CTAGTTGAAT TTAAACCAGA ATACGAAGAT CTATTCAGAT ACGTTTTCGG AAATACAATA
GTCGTTGAAA ATTTAGATTA TGCGAAAATC TTATCAAAAA ACCACAGAGC AAGGTTTGTA
ACTCTTGAAG GGGAAGTTAT CGAACCATCC GGTGCAATGA TCGGTGGAAA TTCAAGAAAA
AAATCGGTTA TAAAAGTAGA TATTGATACT TCAAGGATTG AAAAACTTGC GGAACAGATT
TCAGAACTCG ATAGTACATT ATCTGAAACT AAAGATGAAA TTGAACGCCT TCAAAATAAA
AATGCAACAT ATTCAACTAG AAAAATGGAA CTCGAAAGTA GATTGAAAAT TATTAAAGAT
ATTGAACATA GGAAAGAAGG AATTCTTACA AATAATGGAA TAAAAATTAA AGAACTTGAA
TTAGAGTCCA AAAAGTTGGA CGAAGAACTC GACTATTTGG AAGGCTCAAA AGAAGAACTT
GAAAGAAAAA TTGATGAATA CACTAAAAAA ATTAGTGGAT TTACAACCCA GAGAGATAGG
ATTTCCGAAG AAATAGCATC TTTTGAAAAT TCAGAACATT CCAAAAGAAT CAAAGTAATT
GATGAAACTA TTCTTAATTT TGAAAAGAAA AAGAATGAAT TTGAAAATGA AATAAAAAGA
GATGCAGTAC TCATTAAAGA GGTTTTAATT CCAAAAATAA GCGAATTGAA TAGCAACATC
AAGGAATTAA GCGAAAAAAG GGTAATTCTC GAACAGAACA TTCAATTCTA TAAAAACAAT
GTTGAAAAGA ACTTCGAAAT CTTAAAAAAC AAAAAAGAAC GCTATGAAGA TCTCACCAAA
GATTTAAGAG AACTTACTGA AAAGAAAGAA GCTTTTGAAA AAGAACTGGA AATGTTAAAT
GGCGAGAAAA GAAGAGTTTA TGGAAGAATT AACCAGAATG AAAGCCAGAT CAACAGCCTT
TCGATCGACC TGGCAAAGTA TGAAACTAGA CTTGAAGAAG AAGATAGAAA ATTGTACGTT
TGTGAAAATA TCGAACATAT TTCTGAGGAT ATTACGTCCA AAATAAAAGA ATTTGACGTA
GATGCCCTTG AAAGTCACCA GATCGACCTT GAAGGAAATA TCAAAAAATT AGAACCAATA
AACATGCGTG CAATTGAAGA CTACCAGTAT ATCGTTGACA GGTACGACGA ACTCTTCGAA
AAAAGAACAG ATTACGAAAA TGAAGAGAAA AAATACCTTC ATTTAATAGA AGAAGTCAGT
AAAAGGAAAA AAGAAGTATT CATGGATGTT TACGTAAAAG TTGCTGAAAA CTACGAAAAG
ATATATACTG AAATTGGGGG AAGTGGACAG TTGAGTCTCG AAAATCCGGA CGATCCATTT
TCAGGCGGTT TATTAATCGA TGCATCACCG ATGAATAAAA AATTGCAGAG TTTAGATGTC
ATGAGTGGTG GTGAAAAGTC ACTTACCGCA CTTGCCTTTT TGTTTGCAAT ACAGCACCTG
AATCCTGCCC CATTTTATGT GCTTGATGAG GTCGATGCTG CACTCGATAC AAAAAATGCA
GGGTTGATTG GTGAAATGAT CAAAAATGCA TCAAAAGATT CACAGTTCAT TGTAATATCT
CACCGTGAAC AGATGATAAG TAAATCTGAT GTAATGTATG GGGTTTGTAT GGAAAATGGG
CTCAGCAAAT TAGTTGGATT AAAAATTTAA
 
Protein sequence
MASLSEIHMK NFKSFKNSKL KIPDGFTAIL GPNGSGKSNT IDGICFVLGK TSAKSLRAGK 
FNQLITYHNG KRESFAEVTL FFDNKDRKMP LDSDKVGISR KVKINGDNNY YLIWDEEKEV
KENGEVKKVM EEKRKKVKKS EILDVIGKIS LSADGFNIIL QGDLIKIIDT TPNERRKIID
EISGVAEFDE KGEKAEKELD KAREFIEKID IRINEVKNNL EKLRKEKEDA EIYVKLMEEL
KATKYILTAK KIEFLNGVLE KTKEEIEALK EMKVCFLKEI SEYDAKSNDI RNRLQNLINE
LNEKGNEEIM ELHKSIKEME VTVDNDKKSL NGALDDLKNV NSQSEKKGQD LVETRQKIET
IRTETLQKEA EINALKTEME NLETEKKKLK SKVEESETQT EILKQQERKL SERINESQNE
LYNLKNEFNA LENEINKKSF NLTKNQEIIE TLQKELDDIK SESEDTKVLY KELEDVAVEL
EYSKKKVITL LENKKEYQEK LDKGHAEYIK ENAKIKAMKD MEDFSLDRAV KSVLEAKLPG
VVDIAGNLGK TDAEYKTAIE NAGGNRLNYI VVKRMDDGAR AIQYLKKNNL GRTTFLPLDR
INGPEALYLD DEGVVGRAID LVEFKPEYED LFRYVFGNTI VVENLDYAKI LSKNHRARFV
TLEGEVIEPS GAMIGGNSRK KSVIKVDIDT SRIEKLAEQI SELDSTLSET KDEIERLQNK
NATYSTRKME LESRLKIIKD IEHRKEGILT NNGIKIKELE LESKKLDEEL DYLEGSKEEL
ERKIDEYTKK ISGFTTQRDR ISEEIASFEN SEHSKRIKVI DETILNFEKK KNEFENEIKR
DAVLIKEVLI PKISELNSNI KELSEKRVIL EQNIQFYKNN VEKNFEILKN KKERYEDLTK
DLRELTEKKE AFEKELEMLN GEKRRVYGRI NQNESQINSL SIDLAKYETR LEEEDRKLYV
CENIEHISED ITSKIKEFDV DALESHQIDL EGNIKKLEPI NMRAIEDYQY IVDRYDELFE
KRTDYENEEK KYLHLIEEVS KRKKEVFMDV YVKVAENYEK IYTEIGGSGQ LSLENPDDPF
SGGLLIDASP MNKKLQSLDV MSGGEKSLTA LAFLFAIQHL NPAPFYVLDE VDAALDTKNA
GLIGEMIKNA SKDSQFIVIS HREQMISKSD VMYGVCMENG LSKLVGLKI