Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0642 |
Symbol | |
ID | 5328460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 646092 |
End bp | 649661 |
Gene Length | 3570 bp |
Protein Length | 1189 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640793167 |
Product | chromosome segregation protein SMC |
Protein accession | YP_001329860 |
Protein GI | 150402566 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00029691 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTCAT TATCAGAAAT CCACATGAAA AACTTCAAAT CATTTAAAAA TTCAAAACTA AAAATTCCCG ATGGCTTCAC TGCGATACTG GGGCCGAATG GATCAGGAAA ATCGAACACT ATTGATGGCA TCTGTTTTGT TCTTGGGAAA ACTTCAGCAA AATCGCTCCG TGCAGGTAAA TTCAACCAGC TTATTACTTA CCATAATGGA AAAAGGGAAA GTTTCGCAGA AGTTACACTT TTTTTTGATA ATAAAGATAG GAAAATGCCC CTGGATTCGG ATAAAGTAGG AATATCGAGG AAAGTTAAAA TAAACGGAGA TAACAACTAT TACCTTATAT GGGACGAAGA AAAAGAAGTT AAAGAAAATG GGGAAGTAAA AAAGGTAATG GAAGAAAAAC GGAAAAAAGT AAAAAAATCT GAAATTTTAG ACGTTATTGG AAAAATATCG CTTAGTGCGG ATGGATTTAA TATTATTCTT CAAGGCGACC TCATAAAAAT TATAGATACT ACCCCAAATG AAAGGAGAAA GATTATCGAT GAAATAAGCG GTGTTGCAGA ATTCGATGAA AAAGGGGAAA AAGCGGAAAA GGAACTTGAT AAAGCAAGGG AATTTATTGA AAAAATAGAT ATCAGGATAA ATGAAGTGAA AAACAACCTT GAAAAACTTA GAAAAGAAAA AGAAGATGCA GAAATATACG TTAAATTAAT GGAAGAATTG AAAGCTACAA AGTATATTTT AACTGCTAAA AAAATTGAGT TTTTAAACGG AGTTTTGGAA AAAACCAAAG AAGAAATTGA AGCACTTAAG GAAATGAAAG TTTGTTTTTT GAAAGAAATT TCTGAATACG ATGCAAAATC AAATGATATT AGAAACAGAC TTCAAAATTT GATAAATGAA CTGAATGAAA AGGGAAACGA AGAGATAATG GAACTTCACA AGTCCATTAA AGAAATGGAA GTTACCGTTG ATAATGACAA AAAATCCCTA AACGGGGCCC TTGACGACCT GAAAAATGTA AATTCGCAGT CCGAAAAAAA AGGACAGGAT TTAGTGGAAA CCAGGCAAAA AATAGAAACA ATACGGACTG AAACACTTCA AAAAGAAGCA GAAATTAACG CATTGAAGAC CGAAATGGAA AATCTTGAAA CTGAAAAGAA GAAATTGAAA TCAAAAGTCG AAGAAAGTGA AACTCAAACT GAAATTTTAA AACAGCAAGA GCGAAAACTA TCTGAAAGAA TAAATGAAAG TCAGAATGAA CTCTACAATT TAAAAAATGA ATTTAATGCT CTTGAAAATG AAATCAATAA AAAATCATTT AATTTAACAA AAAATCAAGA AATCATTGAA ACCCTTCAAA AAGAACTCGA TGACATAAAG TCAGAAAGCG AAGATACAAA GGTACTATAT AAAGAACTTG AAGACGTTGC TGTTGAACTC GAATACTCTA AAAAGAAAGT TATCACACTT TTGGAAAATA AAAAAGAGTA TCAAGAAAAA TTGGATAAAG GCCATGCTGA ATACATCAAA GAAAATGCTA AAATCAAGGC AATGAAAGAT ATGGAAGATT TTAGTCTGGA TAGGGCCGTA AAAAGTGTTC TTGAAGCAAA ATTGCCTGGC GTAGTAGATA TTGCGGGAAA CCTTGGAAAG ACAGATGCTG AATACAAAAC TGCAATTGAA AATGCAGGTG GAAACAGGCT AAATTACATC GTTGTAAAAA GAATGGATGA CGGTGCAAGA GCTATTCAGT ATTTGAAAAA GAATAATCTT GGTAGAACCA CATTCTTACC ACTCGATAGA ATCAATGGGC CAGAAGCACT TTATCTTGAT GATGAAGGAG TAGTTGGAAG AGCGATTGAT CTAGTTGAAT TTAAACCAGA ATACGAAGAT CTATTCAGAT ACGTTTTCGG AAATACAATA GTCGTTGAAA ATTTAGATTA TGCGAAAATC TTATCAAAAA ACCACAGAGC AAGGTTTGTA ACTCTTGAAG GGGAAGTTAT CGAACCATCC GGTGCAATGA TCGGTGGAAA TTCAAGAAAA AAATCGGTTA TAAAAGTAGA TATTGATACT TCAAGGATTG AAAAACTTGC GGAACAGATT TCAGAACTCG ATAGTACATT ATCTGAAACT AAAGATGAAA TTGAACGCCT TCAAAATAAA AATGCAACAT ATTCAACTAG AAAAATGGAA CTCGAAAGTA GATTGAAAAT TATTAAAGAT ATTGAACATA GGAAAGAAGG AATTCTTACA AATAATGGAA TAAAAATTAA AGAACTTGAA TTAGAGTCCA AAAAGTTGGA CGAAGAACTC GACTATTTGG AAGGCTCAAA AGAAGAACTT GAAAGAAAAA TTGATGAATA CACTAAAAAA ATTAGTGGAT TTACAACCCA GAGAGATAGG ATTTCCGAAG AAATAGCATC TTTTGAAAAT TCAGAACATT CCAAAAGAAT CAAAGTAATT GATGAAACTA TTCTTAATTT TGAAAAGAAA AAGAATGAAT TTGAAAATGA AATAAAAAGA GATGCAGTAC TCATTAAAGA GGTTTTAATT CCAAAAATAA GCGAATTGAA TAGCAACATC AAGGAATTAA GCGAAAAAAG GGTAATTCTC GAACAGAACA TTCAATTCTA TAAAAACAAT GTTGAAAAGA ACTTCGAAAT CTTAAAAAAC AAAAAAGAAC GCTATGAAGA TCTCACCAAA GATTTAAGAG AACTTACTGA AAAGAAAGAA GCTTTTGAAA AAGAACTGGA AATGTTAAAT GGCGAGAAAA GAAGAGTTTA TGGAAGAATT AACCAGAATG AAAGCCAGAT CAACAGCCTT TCGATCGACC TGGCAAAGTA TGAAACTAGA CTTGAAGAAG AAGATAGAAA ATTGTACGTT TGTGAAAATA TCGAACATAT TTCTGAGGAT ATTACGTCCA AAATAAAAGA ATTTGACGTA GATGCCCTTG AAAGTCACCA GATCGACCTT GAAGGAAATA TCAAAAAATT AGAACCAATA AACATGCGTG CAATTGAAGA CTACCAGTAT ATCGTTGACA GGTACGACGA ACTCTTCGAA AAAAGAACAG ATTACGAAAA TGAAGAGAAA AAATACCTTC ATTTAATAGA AGAAGTCAGT AAAAGGAAAA AAGAAGTATT CATGGATGTT TACGTAAAAG TTGCTGAAAA CTACGAAAAG ATATATACTG AAATTGGGGG AAGTGGACAG TTGAGTCTCG AAAATCCGGA CGATCCATTT TCAGGCGGTT TATTAATCGA TGCATCACCG ATGAATAAAA AATTGCAGAG TTTAGATGTC ATGAGTGGTG GTGAAAAGTC ACTTACCGCA CTTGCCTTTT TGTTTGCAAT ACAGCACCTG AATCCTGCCC CATTTTATGT GCTTGATGAG GTCGATGCTG CACTCGATAC AAAAAATGCA GGGTTGATTG GTGAAATGAT CAAAAATGCA TCAAAAGATT CACAGTTCAT TGTAATATCT CACCGTGAAC AGATGATAAG TAAATCTGAT GTAATGTATG GGGTTTGTAT GGAAAATGGG CTCAGCAAAT TAGTTGGATT AAAAATTTAA
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Protein sequence | MASLSEIHMK NFKSFKNSKL KIPDGFTAIL GPNGSGKSNT IDGICFVLGK TSAKSLRAGK FNQLITYHNG KRESFAEVTL FFDNKDRKMP LDSDKVGISR KVKINGDNNY YLIWDEEKEV KENGEVKKVM EEKRKKVKKS EILDVIGKIS LSADGFNIIL QGDLIKIIDT TPNERRKIID EISGVAEFDE KGEKAEKELD KAREFIEKID IRINEVKNNL EKLRKEKEDA EIYVKLMEEL KATKYILTAK KIEFLNGVLE KTKEEIEALK EMKVCFLKEI SEYDAKSNDI RNRLQNLINE LNEKGNEEIM ELHKSIKEME VTVDNDKKSL NGALDDLKNV NSQSEKKGQD LVETRQKIET IRTETLQKEA EINALKTEME NLETEKKKLK SKVEESETQT EILKQQERKL SERINESQNE LYNLKNEFNA LENEINKKSF NLTKNQEIIE TLQKELDDIK SESEDTKVLY KELEDVAVEL EYSKKKVITL LENKKEYQEK LDKGHAEYIK ENAKIKAMKD MEDFSLDRAV KSVLEAKLPG VVDIAGNLGK TDAEYKTAIE NAGGNRLNYI VVKRMDDGAR AIQYLKKNNL GRTTFLPLDR INGPEALYLD DEGVVGRAID LVEFKPEYED LFRYVFGNTI VVENLDYAKI LSKNHRARFV TLEGEVIEPS GAMIGGNSRK KSVIKVDIDT SRIEKLAEQI SELDSTLSET KDEIERLQNK NATYSTRKME LESRLKIIKD IEHRKEGILT NNGIKIKELE LESKKLDEEL DYLEGSKEEL ERKIDEYTKK ISGFTTQRDR ISEEIASFEN SEHSKRIKVI DETILNFEKK KNEFENEIKR DAVLIKEVLI PKISELNSNI KELSEKRVIL EQNIQFYKNN VEKNFEILKN KKERYEDLTK DLRELTEKKE AFEKELEMLN GEKRRVYGRI NQNESQINSL SIDLAKYETR LEEEDRKLYV CENIEHISED ITSKIKEFDV DALESHQIDL EGNIKKLEPI NMRAIEDYQY IVDRYDELFE KRTDYENEEK KYLHLIEEVS KRKKEVFMDV YVKVAENYEK IYTEIGGSGQ LSLENPDDPF SGGLLIDASP MNKKLQSLDV MSGGEKSLTA LAFLFAIQHL NPAPFYVLDE VDAALDTKNA GLIGEMIKNA SKDSQFIVIS HREQMISKSD VMYGVCMENG LSKLVGLKI
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