Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0639 |
Symbol | |
ID | 5328462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 641326 |
End bp | 641982 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640793164 |
Product | 3-dehydroquinate dehydratase, type I |
Protein accession | YP_001329857 |
Protein GI | 150402563 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0375735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0370197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTGTA TTCCAGTAAT TGATGAGAAT GTTTGCGATG CAATTAATTC TGCAAAAGAA GCTTTAAAAT ACGGAGATAT CGTTGAATTT AGGGTAGATT TATTAAAAGA TGTAACTTTT GAAGATATTG AAGAATTTTC AAAAGTTCCT TCCATAATTA CAATAAGGGC AGAATGGGAA GGCGGAAATT GGAAAAAGTC AGACAATGAA AGAATTGAAC TTTTGAAACA CGCGATAAAA AACAATGCGA AATTTGTAGA TATTGAATTA AAAGAAGAAA GAAATTTGGA ACTTGTAAAA TACAGAAATG AAAGTAATTC AAATACCAAA ATTATTATTT CATACCACGA TTTTGAAAAA ACTCCTGAAA TCGATGAATT AATTGAAGTA GTTGAAAAAG AGTTAAAAAT TGGAGATATT GCAAAATTTG CAACATTCGC ACATTCAAAA GAAGACACTC TAAAAATATT AAATTTAATG AACAAATATG CTGGAAAAAT AATTGCAATT GGTATGGGTG AATCTGGAAA ACTTACAAGG ATTTTGGGTT TAGATTTCGG ATCAATACTC ACTTTCGCAT CAATGGAAGG AAAAGCATCA GCTCCGGGCC AGGTTGACGT CAAAAAACTA AAAGAAATCT TAAAATTGAT AGGATAA
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Protein sequence | MICIPVIDEN VCDAINSAKE ALKYGDIVEF RVDLLKDVTF EDIEEFSKVP SIITIRAEWE GGNWKKSDNE RIELLKHAIK NNAKFVDIEL KEERNLELVK YRNESNSNTK IIISYHDFEK TPEIDELIEV VEKELKIGDI AKFATFAHSK EDTLKILNLM NKYAGKIIAI GMGESGKLTR ILGLDFGSIL TFASMEGKAS APGQVDVKKL KEILKLIG
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