| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0609 |
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| Symbol | |
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| ID | 5328514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 613862 |
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| End bp | 615022 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640793134 |
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| Product | DNA-directed RNA polymerase subunit A'' |
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| Protein accession | YP_001329827 |
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| Protein GI | 150402533 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATGG CTGATTTAGA AAAGAAATTG GAAAATTCTG TCCTGCCACC ATTGTTAAAA
AGAGAACTTT CAGAAAAAAT CTTAAAGGAA GAAATAAGTG AAGAATACCT CGTTGATGAA
ATCATAAGCG AAACTATAAG AGCTTACGAA AGAACCCTTG TAGAACCTGG AGAAGCAGTT
GGTGTTGTTG CAGCACAATC AATTGGTGAA CCTGGTACGC AGATGACAAT GAGAACGTTC
CACTATGCGG GGGTAGCGGA GTTAAACGTT ACCCTTGGTC TTCCAAGAAT GATTGAAATT
GTAGATGCTA GGAAAGAGCC ATCTACCCCA ACAATGACGA TTTACTTAAA TGATGAATTT
AAGGGCGATA GAGAAAAAGC GTCAATGGTT GCAAAAAACA TTGAAAGTAC CGATGTTGAA
TCTGTTTCAG AAGACATCAG TGTAGATTTG ATAAACGAAT GTATAACAAT CGTATTAAAT
ATGCACCAGC TTGAAAGCAG AGGTTTGACT GTTGCTGACG TAATTGAATC TATCAAATCC
AAAATGAAAC TTAAAATTGA AGACCATGAA AATGTTCTCA ATTTAAAAAT TAAAACACCT
TCATTAAAAG CATTAAGAAA AAGACTTCCA AAAGTTAGAG CAATCCACTT GAAAGGTGTG
CAAAACATCA AAAGGGTTAT CATCAGAAAA GAAGTTGATG AATACATCCT TTACAGTGAA
GGTTCAAACA TCAAAGAAGT CTTTGATATC GAAGGTGTGG ATACAACAAA AACCACAACA
AACAACATTG TTGAAATTCA AGATGTTTTA GGTATCGAAG CTGCAAGAAA TGCAATCATT
TATGAAATGG ATGCAACCCT TGGAAACCAG GGTCTTACAG TAGACAAAAG ACACTTGATG
ATGGTAGCAG ACCTTATGTG TACTGATGGA GTTGTAAAAC CAATCGGTAG ACACGGTATT
GGTGGTGAAA AAGCATCAGT TCTTGCAAGA GCAGCATTCG AAGAAACTGT AAAACACCTC
TACTCTGCAT CCATGAGAGG ATATGTTGAT GAACTCGGTG GAGTTGTTGA AAACATTATT
GTTGGAAAAC CAATTGCCAT GGGTACCGGC TGTATCGACG TATGTATCGA CAAGAAATAC
GAAGAAGGAA AAGAATTATA A
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| Protein sequence | MQMADLEKKL ENSVLPPLLK RELSEKILKE EISEEYLVDE IISETIRAYE RTLVEPGEAV
GVVAAQSIGE PGTQMTMRTF HYAGVAELNV TLGLPRMIEI VDARKEPSTP TMTIYLNDEF
KGDREKASMV AKNIESTDVE SVSEDISVDL INECITIVLN MHQLESRGLT VADVIESIKS
KMKLKIEDHE NVLNLKIKTP SLKALRKRLP KVRAIHLKGV QNIKRVIIRK EVDEYILYSE
GSNIKEVFDI EGVDTTKTTT NNIVEIQDVL GIEAARNAII YEMDATLGNQ GLTVDKRHLM
MVADLMCTDG VVKPIGRHGI GGEKASVLAR AAFEETVKHL YSASMRGYVD ELGGVVENII
VGKPIAMGTG CIDVCIDKKY EEGKEL
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