| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0608 |
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| Symbol | |
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| ID | 5328513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 611148 |
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| End bp | 613817 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640793133 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_001329826 |
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| Protein GI | 150402532 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGAT TTGATGTTCC AAAGGAAATC GGAGATATTA CATTTGGATT GCTCTCCCCT
GAACAGATAA GAACCATGTC AGTTGCTAAA ATCGTTACTG CAGACACTTA CGATGACGAT
GGATACCCAA TTGATGGTGG ATTGATGGAT ACTAGACTCG GTGTTATCGA CCCGGGATTA
GTATGTAAAA GCTGCAGCGG AAGAGTTGGA ACTTGTCCCG GACACTTCGG ACATATTGAA
CTTTCAAAAC CAGTAATTCA TATCGGATTT GCGAAAGATA TTTACAAAAT TTTAAAAGCA
GTGTGCCCAC ACTGTGGAAA AGTTACGATT ACAGAGATAA AAAGGGACGA ATACTTAGAA
AAAATGGCCA AACTCGAAGA GGATGGTGGA GACCCTTGGA CACTCTGTGA CGACTTATTA
AAAGAAGCTG CAAAAGGTAG CGTCTGCCCT TCATGTGGTG AAGTAAAAGC GGATGTAAAA
TACGATAAAC CTACTGCATA CCACCAGTTA GATGGAAAAG CTCAAAAACA GTTAACTTCA
TCAGAAGTTA GAGAAATTTT AGAAAAAATC CCTGGTGAAG ACTGTAAACT TCTTGGAATT
AATGCAAAAG TTGCAAGACC CGAATACATG GTTTTAACAG TTTTACCAGT TCCTCCAGTA
ACCGTTAGAC CTTCAATCAC ACTTGAAAGT GGAGAAAGAA GTGAAGATGA CTTGACACAC
AAATTAGTTG ATATTATCAG AATTAACCAG AGGTTAGAAG AAAATATCAA CGGTGGAGCT
CCAAACTTGA TTATTGAAGA TTTATGGGAC TTATTACAGT ACCACATAAA CACGTACTTC
GATAACGAAG CGCCAGGGAT TCCTCCAGCA AGACACAGAA GTGGAAGACC ACTTAGAACA
CTTGCTCAAA GGTTAAAAGG TAAAGAAGGA AGGTTCAGAC ACAACTTAGC AGGTAAAAGG
GTAAACTTCT CTGCAAGGAC TGTTATCTCA CCTGATCCAA GACTCAGTAT TAACGAAGTT
GGTATTCCTA AATTAATCGC AAAAGAATTG ACTGTTCCTG AAAAAGTTAC CCCCTACAAC
ATTGAAAGAG TAAGGGCACT TTTAAGAAAC GGAGCTGACA CCCACCCAGG TGTAAACTAC
GTTATTAAGA AAGTTAAAAC TAAAGATGGA AAAGAAGAAG AATACAAGAT AAAAATTACA
GATGCCAACA AAGACATGTG GGTAGAAAAT ATAACCGATG GAATGGTTAT TGAAAGACAC
CTTTCAGATG GGGACGTCGT GTTGTACAAC AGGCAGCCAT CCTTGCACAG AATGTCAATT
ATGGCACACA AAGTAAAAGT TCTTCCATAC AGAACATTCA GACACAACCT GTGTGTATGT
CCACCTTACA ACGCGGATTT CGATGGTGAC GAAATGAACG TTCACGTCCC ACAATCCGAA
GAAGCTAGAG CTGAAGCTGA AACATTAATG CTCGTTGAAA AACACATTGT TTCCCCAAGA
TTTGGTGGTC CAATCATCGG TGCAATTCAC GACTTTATTT CAGGAGCATA CGTCCTTACA
AGTTCATTAT TTACAAAAGA CGAAGCTTTA ACATTATTGA AAAGCTCCGG ACTAGATAAT
GAACTTGGAG AAGCAGATGT TGTTGAAAAT AAAGTTGAAT ACTACAGCGG AAAATCATTA
TTCAGTAAAA CTCTTCCAGA AGGATTAAGC TTACAGTATA GGGCAAAAAT CTGTAAAAAA
TGTGACACCT GTACCAAAGA AGAATGTGAA CACGACGCTT ACGTTGTAAT TAGAAACGGT
AAACTCTTAC AAGGAGTAAT CGATAAAAAC GGATTTGGTT CAGAAGCAGG AATCATATTA
AACACCCTTG TAAAAGACTT CGGTTCAGAA GATGCGAGAG TATTCCTCGA CTCTGCAACC
AAAATGTCAA TAAAAGCAAT GGTTTTGAAA GGATTTACAA CAGGTATTGA CGACGAAGAT
ATCCCTGAAG AAGCAATTCA AGAAATTCAG GATTTGTTAA ACAAAGCTGA ACAGGATGTT
GAAGATATCG TTGAAAAATA TGAAAACGGA ACTTTAGAAT CCCTCCCAGG AAGGGGTGTT
GAAGAATCCA GAGAAGCATA CATCATGCAG ATTTTAGGTA AAGCGAGGGA CCAAGCTGGT
AACGTTGCTG AAAAATACTT AAGTAAAGAA AACCACGCTG CTCTGATGGC AAGAACCGGT
GCAAGAGGTT CACTCCTTAA CATTACGATG ATGGCTGCAA GTGTTGGTCA GCAATCCGTT
AGGGGTGGTA GGGTCTTTAG AGGTTACAGA GAAAGAACCC TTCCTCACTT TGGAAAAGGA
AGTTTAGATG CAAAATCACA CGGATTTGTT AGAAGCTGTT ATAAAAAAGG ATTAGCACCA
ACAGAATACT TCTTCCACGC GATGGGTGGT AGAGAAGGTC TTGTGGACCA GGCGGTCAGG
ACTGCACAAT CTGGTTACAT GCAGAGAAGA CTCGTAAACG CTTTACAGGA CATTAGGGCG
GAATACGATG GAACCGTAAG AGATTCAAGA GGACTTGTTG TTCAGTTTGA ATACGGGGAA
GACTTGGTAG ACCCTGCAAA AGCAGACCAC GGAAAAGGTG TAGATTTAGA TAAAATATTC
ACAAAAGTTA ATTCAAAATA TGAAAATTAA
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| Protein sequence | MDRFDVPKEI GDITFGLLSP EQIRTMSVAK IVTADTYDDD GYPIDGGLMD TRLGVIDPGL
VCKSCSGRVG TCPGHFGHIE LSKPVIHIGF AKDIYKILKA VCPHCGKVTI TEIKRDEYLE
KMAKLEEDGG DPWTLCDDLL KEAAKGSVCP SCGEVKADVK YDKPTAYHQL DGKAQKQLTS
SEVREILEKI PGEDCKLLGI NAKVARPEYM VLTVLPVPPV TVRPSITLES GERSEDDLTH
KLVDIIRINQ RLEENINGGA PNLIIEDLWD LLQYHINTYF DNEAPGIPPA RHRSGRPLRT
LAQRLKGKEG RFRHNLAGKR VNFSARTVIS PDPRLSINEV GIPKLIAKEL TVPEKVTPYN
IERVRALLRN GADTHPGVNY VIKKVKTKDG KEEEYKIKIT DANKDMWVEN ITDGMVIERH
LSDGDVVLYN RQPSLHRMSI MAHKVKVLPY RTFRHNLCVC PPYNADFDGD EMNVHVPQSE
EARAEAETLM LVEKHIVSPR FGGPIIGAIH DFISGAYVLT SSLFTKDEAL TLLKSSGLDN
ELGEADVVEN KVEYYSGKSL FSKTLPEGLS LQYRAKICKK CDTCTKEECE HDAYVVIRNG
KLLQGVIDKN GFGSEAGIIL NTLVKDFGSE DARVFLDSAT KMSIKAMVLK GFTTGIDDED
IPEEAIQEIQ DLLNKAEQDV EDIVEKYENG TLESLPGRGV EESREAYIMQ ILGKARDQAG
NVAEKYLSKE NHAALMARTG ARGSLLNITM MAASVGQQSV RGGRVFRGYR ERTLPHFGKG
SLDAKSHGFV RSCYKKGLAP TEYFFHAMGG REGLVDQAVR TAQSGYMQRR LVNALQDIRA
EYDGTVRDSR GLVVQFEYGE DLVDPAKADH GKGVDLDKIF TKVNSKYEN
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