Gene MmarC7_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0597 
Symbol 
ID5328539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp600087 
End bp600875 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content40% 
IMG OID640793123 
Productribulose-1,5-biphosphate synthetase 
Protein accessionYP_001329816 
Protein GI150402522 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1635] Flavoprotein involved in thiazole biosynthesis 
TIGRFAM ID[TIGR00292] thiazole biosynthesis enzyme 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.469921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.642946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAA AGCTCAGAGC AGACGAAGTA GCAGTAACAA AATCAATATT GAAGTCCACT 
TTCAACATGT GGATGGATAT AATTGACGTT GACGTTGTAA TTATTGGTGC AGGCCCAAGC
GGACTTACAG CTGCAAAATA TTTGGCTCAA AATGGAGTTA AAACCGTAGT TCTCGAAAGA
CACCTTTCAT TTGGTGGTGG AACTTGGGGC GGAGGAATGG GCTTTCCAAA CATCGTCGTG
GAAAAACCTG CAGATGAGAT ATTAAGAGAA GCTGGAATTA AATTGGATGA AGTAGACGGT
GAAGATGAAT TATTCACCGC AGATTCAGTG GAAGTTCCTG CAAAACTCGG GGTTGCTGCA
ATTGACGCAG GTGCAAAAAT ATTAACAGGA ATTGTTGTAG AAGACTTGAT TTTAAAAGAA
GATAAAATTG CAGGAGTAGT TATTCAGTCA TATGCGATTG AAAAAGCAGG ACTTCACATC
GACCCACTCA CAATCAGTGC AAAATATGTT ATAGACTCAA CAGGACACGA CGCTTCAGCA
GTTCACACAC TTGCTAGAAA AAATAAGGAC CTTGGAATCG AAGTTCCTGG CGAAAAATCC
ATGTGGGCAG AAAAAGGTGA AAATTCACTC ACAAGAAACA CGAGAGAAAT ATTCCCTGGA
CTTTACGTTT GTGGAATGGC TGCAAATGCG TACCACGCAG GTTACAGAAT GGGTGCAATC
TTTGGTGGAA TGTATCTTTC TGGAAAAAAA TGTGCGGAAA TGATTTTGGA AAAATTGGAA
AATAAATAA
 
Protein sequence
MDGKLRADEV AVTKSILKST FNMWMDIIDV DVVIIGAGPS GLTAAKYLAQ NGVKTVVLER 
HLSFGGGTWG GGMGFPNIVV EKPADEILRE AGIKLDEVDG EDELFTADSV EVPAKLGVAA
IDAGAKILTG IVVEDLILKE DKIAGVVIQS YAIEKAGLHI DPLTISAKYV IDSTGHDASA
VHTLARKNKD LGIEVPGEKS MWAEKGENSL TRNTREIFPG LYVCGMAANA YHAGYRMGAI
FGGMYLSGKK CAEMILEKLE NK