| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0593 |
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| Symbol | |
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| ID | 5328543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 596245 |
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| End bp | 597327 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640793119 |
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| Product | bifunctional RNAse/5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_001329812 |
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| Protein GI | 150402518 |
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| COG category | [H] Coenzyme transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG1658] Small primase-like proteins (Toprim domain)
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.075481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.240855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC AGGAATATTT AGAAAAACTC CTTTTGATAA TCGATGATCT AAAATTACTG
GCTGAAAAAG GAATTCCAAT ATTGGTGGAA GGGCCAAATG ACATATTATC ATTGAAAAAT
TTAAAAATAA AGGCTAATTT TATAACTGTG TCAAATACTC CTGTATTTCA GATAGCAGAT
GATTTAATTG CAAAAAATAT CCCTGAAGTT ATACTTTTAA CAGATTTTGA CCGAGCTGGC
AGAGTTTATG CTAAAAATAT AATGGAAGAA TTTCAAAGCA GGGGAATTAA AGTAAATAAT
CTAATCAGAA AAGAGATAAT TAAGTATTCT CACGGTGATT TAAAGGATAT TGAAAGCCTA
TATCCATATA TTTCGAGAAG AATTACAATT AATGGCGATT TAAGTGATAT CATGGTTCCA
TATGTTATAT CAAATGTTGG AATGACTTTA GATGGGAAAC TGGCAACAAT AGAAAATGAT
TCGAGAATTT CTGGTGAAAA CGATTTAAAA AGGGTTCACG AGATACGAAA GGATGTAGAT
GCAATACTTG TGGGAATTGG AACTGTTTTA AAAGACGATC CAAGGCTTAC TGTTCATAAA
ATCAATGCAT CTCCAAAGGA CAATCCGTTA AGAATTGTGG TTGACAGCAG CTTAAAAATT
TCATTAAATG CAAGGGTATT AAATAAGGAT GCAAAAACTG TGATTGCAAC AACAACTCCG
ATTTCAGATG AAAAAGAAGA AAAAATCAGA AAATTAAAAG AAATGGGAAT CACGGTATTA
CGAGCAGGGG TTCAAAAAGT TGATTTAAGA AAAATTATGA ATGAAATTTA CAAAATGGGA
ATAAATAAAA TTCTTCTTGA AGGTGGCGGG ACTTTAAACT GGGGAATGTT TAAAGAAAAC
TTGATAAACG AAGTTAGGGT TTATATCGCT CCAAAAGTGT TCGGAGGGGC AAATTCTCCA
ACATATGTTG ATGGAGAAGG GTTTAAAAAC GTTGAAGAAT GTACAAAATT AGAATTAAAA
AATTATTATC CATTAGATGA CGGAATTGTC TTAGAATATA GGGTAATTGG TTCATCTAAG
TAA
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| Protein sequence | MDKQEYLEKL LLIIDDLKLL AEKGIPILVE GPNDILSLKN LKIKANFITV SNTPVFQIAD
DLIAKNIPEV ILLTDFDRAG RVYAKNIMEE FQSRGIKVNN LIRKEIIKYS HGDLKDIESL
YPYISRRITI NGDLSDIMVP YVISNVGMTL DGKLATIEND SRISGENDLK RVHEIRKDVD
AILVGIGTVL KDDPRLTVHK INASPKDNPL RIVVDSSLKI SLNARVLNKD AKTVIATTTP
ISDEKEEKIR KLKEMGITVL RAGVQKVDLR KIMNEIYKMG INKILLEGGG TLNWGMFKEN
LINEVRVYIA PKVFGGANSP TYVDGEGFKN VEECTKLELK NYYPLDDGIV LEYRVIGSSK
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